Citrus sinensis (Valencia orange): 102613106
Help
Entry
102613106 CDS
T02983
Name
(RefSeq) endo-1,4-beta-xylanase 5-like
Organism
cit
Citrus sinensis (Valencia orange)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_10
Glyco_hydro_cc
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
102613106
NCBI-ProteinID:
XP_015388268
LinkDB
All DBs
Position
8:join(1180927..1181002,1181112..1181146,1181233..1181389,1181580..1181752,1181874..1181975,1182133..1182279,1182396..1183370)
Genome browser
AA seq
554 aa
AA seq
DB search
MKYTPTSAGFLICFVLLGASLAASYDGPLYDFTAYTECKELPEQPLYNGGMLKNHPPENF
SSIAHFSTGFYTPAFILHNLTPGTIYCFSIWLKIEGANSAHVRASLKTENSVYNCVGSAA
AKQGCWSFLKGGFVLDSPSNLSILFFQNSDDRDINIAVASASLQPFTDEQWRFNQQYIIN
TERKRAVTIHAADGSGDTLQGAEITIEQVSKDFPFGSAIASTILGNLPYQKWFVERFNAA
VFENELKWYATEPEQGKINYTIADQMMEFVRSNQLIARGHNIFWEDPKYTPAWVRNLTGP
ALQSAVNSRIQSLMNKYKEEFIHWDVSNEMLHFDFYEQRLGHDATLHFYETAHQSDPLAT
LFMNEFNVVETCSDENSTVDRYISRLRELKRGGVLMDGIGLESHFTVPNLPLMRAILDKL
ATLNLPIWLTEVDISGKLDKETQAVYLEQVLREGFSHPSVNGIMLWTALHPNGCYQMCLT
DNNLQNLPAGNIVDKLLKEWQTGEVTGHTDGHGSFSFYGFLGEYTVSVKYGNRTANSTFS
LCQGDETRHVTIRV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacactcctacttctgctggattcttgatttgtttcgttcttttaggagcttcc
ttggctgcttcatatgacgggccattgtatgattttactgcttacaccgagtgtaaagag
ctgccagagcagccactctacaatggaggaatgctcaaaaatcaccctccagaaaatttc
agtagcattgcccacttctcgactggtttctatacaccagctttcatattgcacaatctc
acaccgggcaccatctactgtttctctatttggttgaagattgagggtgctaattcggct
cacgtaagggcaagcctaaagacagagaactcagtgtacaattgtgtagggtctgctgct
gccaaacaaggatgctggtcatttctcaaaggcggatttgttcttgattcgccatcaaac
ttatctatattattctttcagaattcggatgacagggatatcaatatagcagttgctagc
gcttcgttgcagccatttactgatgagcaatggaggttcaaccagcaatatataattaac
actgaaaggaaacgggctgtgacaatccatgcagcagatggaagtggagatacattacaa
ggggcagaaatcacaatagagcaggtctcaaaagattttccctttggatctgcaattgca
agtacaattcttggaaacttaccctatcagaaatggtttgttgagcgattcaatgcagct
gtattcgaaaacgaactgaaatggtatgcaacagaaccagagcaaggcaagatcaactac
actatagcagatcagatgatggaatttgttagatctaatcaactaattgccagaggccac
aatatattctgggaagatcctaaatacacaccagcatgggttcgcaatctcactggtcct
gcactacaatcagctgtcaactcccggatacaaagcctgatgaacaaatacaaagaagag
ttcatacattgggatgtcagcaatgagatgcttcacttcgatttctatgagcagcgacta
ggccatgatgcaaccttgcatttctacgaaacagcacaccaatcagaccctttagcaact
ctattcatgaatgaattcaacgtggtggagacttgcagtgatgagaactcaaccgtcgat
agatacatttcaagactaagagaactgaaaaggggcggggtgttgatggatggcataggc
ctagaaagtcactttacagttccaaatcttcctctcatgagagctatcctagacaaactg
gccacactgaatctcccaatttggcttacagaagtcgatatcagcggcaaactcgataag
gaaacacaggcagtttacctagagcaggtattaagggaaggcttctcacatccttcagtg
aacggaataatgctttggacagcattacatcctaatgggtgttaccaaatgtgcctgact
gataataatttgcagaatctgcctgctggtaacatagttgacaaacttttgaaggagtgg
caaactggtgaagtaacgggtcacacggatggccatggttcatttagcttttacggcttc
ttaggtgaatacacagtgagtgttaagtatggcaatagaactgcaaactcaacattttcg
ctctgtcaaggcgatgaaactagacacgttaccattcgagtgtaa
DBGET
integrated database retrieval system
