KEGG   Citrus sinensis (Valencia orange): 102614751
Entry
102614751         CDS       T02983                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102614751
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102614751
   03041 Spliceosome [BR:cit03041]
    102614751
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     102614751
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     102614751
Spliceosome [BR:cit03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    102614751
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 102614751
NCBI-ProteinID: XP_024957396
LinkDB
Position
1:16280577..16281854
AA seq 425 aa
MDSIKKRKIDENGAVLSDLESPNRLTPQDARKIVERLTSDQLLDVLSSAVARHDDVLESV
RSIADADPTQRKLFIRGLGWDTTTEGLRSIFSAYGELEEAVVILDKATGKSKGYGFITFK
HIDGAMLALKEPSKKIDGRVTVTNLAVAGNSGNSTNNPVDVSLRKIFVGNVPNDMSADKL
LAHFACYGEIEEGPLGFDKQTGKPKGFALFVYKTAEGAQAALVDPIKTVDGKQLNCRLAD
NKKAKPMGPDGGGPGNVSMNHGDGMGMVPPSAGGSYGGPGGHGYPFSGPPPLGHHLNSSL
GGPGQVPSSMGGVGAGGYGAGLGGPYGGYGGPGSTGYGGLGGAGGGAGAGGALGGAAGGL
GGGSSLYRLPPSSAGMPSGGYPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGMYPN
VPPYY
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggattctattaagaaacgcaagatagatgaaaacggcgccgttttgtccgaccttgag
tctcccaatagactgaccccgcaagacgcccgcaaaatcgtcgaacgcttaaccagcgat
caactcctcgacgtcctctcctccgctgttgcccgccacgacgacgttcttgaatccgtc
cgatctatcgccgacgcggaccccacccagcgcaagctatttatccgcggccttggctgg
gacaccaccaccgagggcctccgctccatattctccgcctacggtgagctcgaagaggcc
gtcgtcatcctcgataaagccactggtaaatccaaaggttatggctttatcacttttaaa
cacatcgacggtgcgatgttggctttgaaagagccgagtaagaagatagatgggcgcgtg
acggtcacgaatcttgcggtggctgggaattcggggaatagtactaataacccggttgat
gtgtcgttgaggaagatatttgtcgggaatgtgccgaacgacatgtcggctgataaattg
ctagcgcatttcgcttgttatggggaaattgaagagggcccgttgggttttgataagcaa
acgggaaagcctaaagggttcgctttgtttgtttataagactgcagagggagctcaagcg
gctcttgtggatccgattaagacggtggacggtaagcaattgaattgtagactagccgat
aataaaaaggctaagccaatggggcctgatgggggagggcctggcaatgttagcatgaat
catggtgatggaatgggaatggttccgccttctgccggtggatcatatggtgggccgggt
ggacatgggtacccgttttctggccctccgccattgggacatcatctgaactcatcatta
ggagggccgggtcaggtaccatcttccatgggtggtgttggtgctggtgggtatggtgct
gggttgggtgggccttacggtggttatggagggcctggttctacaggttacggtgggctg
ggtggtgctggtgggggtgctggagcaggcggggcactaggtggtgctgctggaggattg
ggtggagggtcctctttgtacaggttgccaccgagttcggctggaatgccatctggaggg
tatcctgaggccgggcattacggcttgtcatctacttcggccggttatccaagtcagcat
caccaggcagcagggacgtctccagttcctagagttcctccgggtggaatgtacccgaac
gtgccgccttactattga

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