KEGG   Citrus sinensis (Valencia orange): 102619247
Entry
102619247         CDS       T02983                                 
Name
(RefSeq) ubiquitin C-terminal hydrolase 13-like
  KO
K11838  ubiquitin carboxyl-terminal hydrolase 7 [EC:3.4.19.12]
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    102619247
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:cit01002]
    102619247
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cit04121]
    102619247
Enzymes [BR:cit01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     102619247
Peptidases and inhibitors [BR:cit01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   102619247
Ubiquitin system [BR:cit04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    102619247
SSDB
Motif
Pfam: USP7_ICP0_bdg UCH USP7_C2 MATH UCH_1 Nitroreductase
Other DBs
NCBI-GeneID: 102619247
NCBI-ProteinID: XP_006487815
LinkDB
Position
8:join(22774684..22774713,22774968..22775034,22775252..22775405,22775529..22775686,22776687..22776952,22777051..22777269,22777355..22777463,22777545..22777660,22779060..22779158,22779628..22779737,22780092..22780166,22781844..22781922,22782029..22782175,22782614..22782694,22782791..22782910,22784287..22784409,22785203..22785280,22785371..22785459,22785573..22785681,22786435..22786503,22786583..22786693,22788145..22788200,22788332..22788509,22788601..22788702,22788793..22788864,22789003..22789068,22789169..22789234,22789393..22789479,22789566..22789682,22790048..22790122,22790213..22790299,22790583..22790624)
AA seq 1118 aa
MTIMTPAPIDQQEDEEMLVPHSDLADNHQPMEVVAQPETANAVENNQPLDDPPSSRFTWR
IENFSRLNTKKHYSEIFIVGGFKWRVLIFPKGNNVDHLSMYLDVADSSSLPYGWSRYAQF
SLAVINQIHSKYSVRKDTQHQFNARESDWGFTSFMPLGELYDPNRGYLVNDTLIVEAEVI
VRRVVDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLFHIPYFRKAVYHMPTTENDMPSG
SIPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLSEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE
GDNKYHAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLD
RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
LKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAE
HLRERLKKEQEEKEHKKKEKAEAHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVRSFRI
QKQIPFNLFKEEVAKEFGVPVQFQRFWLWAKRQNHTYRPNRPLTHLEETQTVGQLREVSN
KVHNAELKLFLEVERGPDLRPIAPPEKTKEDILLFFKLYDPEKEELRYVGRLFVKSTGKP
MEYLPKLNEMAGYAPDEEIDLYEEIKFEPSVMCEPIEKRCTFRASQLEDGDIICFQKSTP
IEGVGKFRYPEVPSFLDYVHNRQVVHFRSLEKPKEDDFCLEMSKLYTYDDVVERVAQQLG
LDDPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLIHYNQTSDVLYYEVLDIPLPELQC
LKTLKVAFHHATKDEVSVHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYHKIY
KIFPLNEKIENINDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFTKETAQNQMQIQNFGEP
FFLVIHEGETLQEIKVRIQRKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSSRFQRRDV
YGAWEQYLGLEHSDSAPKRAYAANQNRHTYEKPVKIYN
NT seq 3357 nt   +upstreamnt  +downstreamnt
atgactatcatgaccccagctccaatcgatcaacaagaggatgaggagatgctcgtccca
cactctgatttggccgacaatcaccagcccatggaagttgttgctcaacctgaaactgcc
aatgctgtggagaataatcagccattggatgatcctccatcgtcaagatttacatggagg
attgagaacttttctaggttgaatacgaaaaagcactattctgagattttcattgttggt
ggcttcaaatggcgtgtgcttatttttccaaaaggaaacaatgtggaccatctgtcaatg
tatctagatgttgctgattcatcaagtttaccatatggttggagtagatatgcacagttt
agcttggcagtgattaatcaaatccattccaagtactcggtgagaaaagatacacaacac
caattcaatgctcgagaaagtgattggggttttacatcctttatgcctcttggtgaactc
tatgaccctaatagagggtatcttgtgaatgatacacttatagttgaagcagaggttatt
gtgcgtagggttgtggattactggtcatatgactcaaaaaaagagactggttatgttgga
cttaagaatcaaggggccacatgttacatgaactctcttctccaaactctatttcacatt
ccttattttcggaaggctgtataccatatgcctacaacagaaaatgatatgccatctggt
agcatcccattggctctgcagagtttgttttacaagctccaatacagcgacagcagtgtt
gcaaccaaggagctgaccaaatcttttggatgggacacatatgactccttcatgcaacat
gatgtgcaagagcttaatcgagttctgtctgaaaaacttgaagataaaatgaagggaact
gttgtagagggcaccatacaacagttgtttgaagggcaccacatgaactacattgagtgc
atcaatgtagattacaagtcaacaagaaaagagtcattttatgaccttcagcttgacgtc
aaaggctgtcgtgatgtttatgcttctttcgataaatatgtagaagttgaacgtcttgag
ggtgataacaagtatcatgccgagcaatatggattgcaggatgctaagaaaggtgtgttg
ttcattgactttccccctgtccttcaacttcagctaaagcgatttgaatatgattttatg
cgggataccatggtgaagattaatgaccgttatgagttccctctgcaacttgaccttgat
cgagagaatggcaagtatttgtcacctgatgctgacaggagtgttcgcaacctttacaca
cttcacagtgttttggttcacagtggcggggtgcatggtggtcattattatgcctttatc
agaccgactctttctgatcagtggtataaatttgatgatgaaagggtaacaaaagaagat
ctgaaaagggcactagaagagcagtacggtggtgaagaggagttaccacagacaaatccg
ggatttaacaacactccttttaaatttaccaaatattcgaatgcatatatgctggtgtat
atacgtgaaagtgacaaggacaagataatttgtaatgtggatgagcaggatattgcagaa
caccttcgtgaaaggttgaaaaaagagcaagaagaaaaagaacacaagaagaaagagaag
gcagaagcacacctttataccgttatcaaggttgcaagggatgatgaccttttggaacag
attggaaaggatatctattttgatcttgtggatcatgacaaagttaggagttttcgtatt
cagaagcagatacctttcaaccttttcaaggaagaggttgccaaagagtttggtgttccg
gtgcaatttcagcgcttttggctgtgggcaaagcgtcaaaaccatacataccgtcctaat
aggccattgacacatctagaagaaacacaaactgttggacagttgagggaggtgtcaaat
aaggtccataatgcagaactgaagttattcttagaagtagaacgtggaccggatttacgc
cctattgctccacctgagaagacaaaggaagatattttgctcttcttcaagctttatgac
cctgagaaagaagagctgcgttatgttggaaggctttttgtgaaaagtactggtaagccg
atggaatatttgccaaaactaaatgaaatggctggttatgctcctgatgaagaaatcgat
ctatatgaggaaattaagtttgagcccagtgtaatgtgtgagcccatagaaaagagatgc
acgtttcgagctagccagcttgaagatggagacattatttgctttcaaaaatctactcca
attgaaggtgttggtaaatttcgctatccggaagtgccttcattcttggactatgtgcac
aatcgccaagtggttcattttcggtctcttgaaaaacccaaggaagatgatttctgtcta
gagatgtcaaagctttatacttatgatgacgttgtagaaagagtagctcagcaactgggt
ttggatgatccatctaagatcaggctcacatcacacaactgttactctcagcaacctaaa
ccccaacccattaagtaccgtggggttgatcatttatctgacatgctgatccactacaac
cagacttctgatgtattatattatgaagtattggacattccacttccagaattacaatgt
ctgaaaacactcaaagtcgcgtttcatcatgctaccaaggatgaagtgagcgttcatact
attagactaccaaagcagagtactgtaggggatgtgattaatgatcttaaaacaaaggtg
gaattgtcacatcctgatgcagaacttcgattgctggaagttttctatcataagatctat
aagatttttccacttaatgaaaagattgagaatataaatgatcaatactggacattaagg
gcagaagagattccagaagaagaaaaaaatcttggtccacatgatcgtctaattcatgtt
tatcactttacaaaagagacagctcagaaccagatgcaaattcagaacttcggtgaaccg
tttttcttagttatacatgaaggtgagactctgcaagaaataaaagtgcgaatacagagg
aaactgcaagttccagatgaagagtttgctaagtggaagtttgcattcctttctcttggt
cgcccagaataccttcaggacacggacattgtttccagtcgttttcagagaagagatgtt
tatggtgcttgggagcaatatcttggattggaacactcagacagtgctcctaaaagggca
tatgctgctaaccagaatcggcatacgtatgagaagccagttaaaatctacaattag

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