Citrus sinensis (Valencia orange): 102621689
Help
Entry
102621689 CDS
T02983
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 33A-like isoform X1
KO
K27472
mediator of RNA polymerase II transcription subunit 33
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cit03021
]
102621689
Transcription machinery [BR:
cit03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
102621689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
102621689
NCBI-ProteinID:
XP_006481264
LinkDB
All DBs
Position
6:join(18319329..18319744,18319836..18320159,18321013..18321329,18321490..18321581,18321667..18322051,18322207..18322417,18322524..18322638,18322756..18322917,18324464..18325130,18325353..18325559,18325789..18326879)
Genome browser
AA seq
1328 aa
AA seq
DB search
MANQSKEMMEEESCLLSAAAFEERVIETAKRCQQRHDSPVMWAVEMTRCLKSGSGSVVEL
GEVLVSYLCFQNNHPSLWKFLDYALTSNLLSPIHILSLLTSRVIPHRRSQPQAFRLYLEL
LSRYALNFHAVASEDCNVKIIESVDACLQLSRTYNVRVVEFGHALVLSFFDLVVRLIDSL
FEDMGLQVGSLDQQSMEIDSIGNFSVGNNEHFEQIRRKNSLLVIEVLNKLMDSSKAMVLI
RLIHFNMPESFNGLLQRLQFLEANKLESSKLKTVSQLLARLCDNVRNVPSYDYKLNKHRF
IGMLIDTKSLRPMRSCNSESSWSSCWLSFDIFMENSMDGKQLPVTSAIIVLTRIITTLRV
LNRASWQETFLALWLSALRLVQRERDPPEGPLPHLEARLGILLSIVPLAIANVLAEQANI
QLSTLQGSKTSGSIETGCGHGMEEKSLASKKEGLVSSLQALGNFSALLCPPASVACEANN
AAAKAASFISVSKNMKDGICSGSPSETLLNSGGNMRHLIVEACIARNLIDTSAYYWPGYV
SASVIAVNEFSPVQKSPWSMFMEGAPLNGSLVNLLFSTPASSLAEIEKLYHIALTGSAEE
RSAAAKILCGASLARGWNIQEHVVRFVVKLLSPPIPPGYTGPRSHLVDHMPMLTAIFFGA
SSVDTVHILSLHGLVPDVVASLMPLCEVFGSLVPTSSSKSSTGDEPSVYMVFSCAFLFLV
RLWKFYRSPHELCLSGGTLAGELTLEYLLLLHNSHIASRTSAAQSERNSNLDQLDTVSDD
PIYIDHFPKLRAWYCQNKTCIASTLSGLCSGNPVHQVANKILSMIYSKMTKTGASSSNSS
TPPSGSASESPACIGEDAYQRPMLPAWEVLEAIPFVLEAILSACAYGRLSSRDLITGLRE
LVDFLPASIATIISYFSAEISRGIWKAVPMNGTDWPSPAPMLPSIESEIKEILAAVGVSV
PCCSAGTSPLTLPLPVAVLVSLTITFKLTKSLDYIHAVIGPALENCAAGCSWPCIPIIGS
LWAQKVRRWHDFIVVSCSRSVFWKNQEAVSQLLRSCFTSFLGSLHVSSLLTNQSSVNNLL
GSDVAARAVCPSLAPGYLYLRSCRTIHNVQHVNDVIVGLVAEFAREAAAKWASSDLPRLK
SSQASLSLATSKAREVASLGASLLCATAGLQVVQELYRETIPTWLLSSRDEKLGKVSAVA
HIMEGYAMAYMWVLSGGLIWGFEAKMPSWAVSRRRYLIGTHFEYLSRALEGNIKLGCDPA
TWRAYVSCLVGLVVSSAPAWIQEVKPETLRKLASGLRGWHECELALSLLERGGIGSIPSV
MELLHVIN
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaatcgaaagaaatgatggaggaagagtcgtgcttgttgagcgccgctgcg
ttcgaagagagggttatagagacagcgaagcgatgccagcagcgccacgacagccccgtg
atgtgggcagtagagatgaccagatgcttaaaatcgggctcaggctccgtcgttgaatta
ggagaagtgttggtttcttatctctgcttccaaaacaatcacccttccctttggaagttt
ctagattacgctttaacgtccaatctcttgtcgcccattcatattctctcgcttctcact
tcacgtgtaattcctcaccgtcgatctcagcctcaggcctttcggctttatctcgaactc
ctctctcgttacgctcttaattttcacgccgttgcctccgaggactgtaatgtcaagata
atagaatctgttgacgcttgtcttcagctttctcggacttacaatgtgcgtgttgtggag
tttgggcatgcgttagttttgtcctttttcgatcttgttgttcgtttgattgatagcttg
ttcgaggatatgggactgcaagtggggtctttagatcaacagagtatggaaattgactct
attgggaattttagtgtgggaaataacgaacattttgagcagattaggagaaagaattct
cttttggtcattgaggtgttgaataaactgatggatagcagtaaggctatggttctaatt
cgcctcattcacttcaacatgcctgaaagtttcaatggacttctgcagaggctacagttt
ctggaagccaacaagttggaatcctcaaaactgaaaacggtcagccagcttttggctagg
ttgtgtgataacgtccgaaatgttcccagttatgactataagttaaataagcacaggttc
attggaatgctgattgatactaaatctttgaggccgatgcgtagctgtaattctgaatcc
agttggtcttcttgttggcttagctttgatatttttatggagaattcaatggatgggaaa
caacttccagtcacatcagccatcattgtgcttacacgaattattactacactccgagta
cttaaccgggcaagctggcaagaaacttttctcgcgctttggctttccgctcttcgactt
gtgcagagagaacgtgatcctcctgaaggccctcttccacatcttgaggcccgccttgga
atccttttgtcgattgttcccttggcaattgctaatgttttggctgaacaggccaacatt
caactgtctacactccaggggtctaagacgtctgggtctatagagactggatgtggacat
ggaatggaagagaaaagtcttgcttcaaagaaagagggattagtttcctctctacaggca
cttggaaatttttctgcactcttatgccctccagcatcagttgcttgtgaagctaataat
gctgctgcaaaagcagcaagcttcatatccgtttctaagaatatgaaggatggtatatgc
agtggcagtcctagtgaaacattactaaattcaggtggcaacatgaggcacctcattgtg
gaagcttgcattgcaagaaatttaattgacacatcagcatattattggcctggttatgtg
tccgcatcagttatcgcagtaaatgagttttcaccagttcaaaaatctccttggtccatg
tttatggaaggagctccgttaaatggttctttagtaaatttgctttttagtactcctgct
tcaagtttagcggagatagagaagttatatcacattgcattaactggatcagcagaggag
agatcagcagctgcaaaaattctttgtggtgcatcccttgctcgtggatggaatattcag
gaacatgtggtgcgctttgtggtcaagcttctttctcctcctattccccctggttatact
ggtccaaggagtcacttggttgatcatatgcccatgctaactgctatcttttttggagca
tcctcagttgatactgttcatatactttctttgcatggcttagtccccgatgttgtggca
tcattaatgccactttgtgaggtctttggatcacttgtacctacatcaagtagcaaatca
agtacaggtgatgagccctcggtctacatggtcttttcttgtgcatttctttttcttgtt
cgtctatggaaattctatagatcacctcatgagctgtgcctgagtggcggaacactggcg
ggtgaacttactctagagtatcttttgttactgcataatagtcacatcgcatcccgtact
tctgctgcccagagtgaaagaaacagtaacttggaccagcttgacactgtgtcagatgac
cctatatacattgatcattttccaaaactacgtgcttggtactgtcaaaacaaaacttgc
attgcttcaacgctttctggcctttgcagtggcaatcctgttcatcaagttgctaataag
attttgagtatgatttactcgaaaatgactaaaactggggcatcgtcaagtaattcttca
acaccaccttccggcagtgcatctgagtcccctgcatgtattggagaagatgcttaccag
agacctatgctccctgcatgggaggtgctggaagccatcccgtttgttctcgaggcaatt
ttaagtgcttgtgcctatggaaggctttcatctcgggacttgataacaggcctgagggag
cttgtggactttttgcctgcctcaattgccacaatcatcagttatttctctgcagaaatt
agtcgtggtatatggaaagcagtcccaatgaatggaacagattggcctagtccagcacca
atgcttccttcaattgagtctgaaataaaagaaatacttgctgctgtaggtgtttctgtt
ccatgctgttcagctgggacatcacctttaactcttccacttccagttgcagttcttgtc
agtttaaccattactttcaaactcactaagagcctggattacatccatgctgtcataggg
ccggccttggagaactgtgctgcaggctgctcttggccttgcattccaataattggctct
ctgtgggcacaaaaggtccgtcgttggcatgacttcatagttgtatcatgttctcgttct
gttttctggaaaaaccaagaagcagtttcccagctcctgagaagttgcttcacttcattc
cttggatcccttcatgtgtcttctctgttgaccaatcaaagcagtgtaaataacttgctg
ggaagcgatgttgcagctcgtgctgtttgtccttctctagcacctggatatctttacctt
cgctcttgcagaacaatacacaacgtccaacatgtgaatgatgtaattgtagggcttgta
gcagagtttgctcgggaagcagctgcgaaatgggcaagctcagatttaccccgcttgaag
tctagtcaagcgtcactgtcccttgccacttccaaggcaagagaggtagcttcactggga
gcaagcctcttgtgtgccactgctggattgcaggtggtccaagaactctaccgggaaact
ataccaacctggttactatcatccagggatgaaaaacttggcaaggtgagtgctgtggcc
catattatggaaggttatgcaatggcttatatgtgggttctatctgggggattgatatgg
ggttttgaggccaagatgccatcatgggcggtctctaggaggagatatctcattgggact
cacttcgagtatttgtcgagggcattggaggggaacataaaacttggctgtgatcctgct
acttggagagcttatgtttcctgtctagttgggctagtagtaagctctgctccagcatgg
attcaagaagtgaagcctgagactctgaggaaattggcaagtggattgagaggatggcat
gaatgcgagctggcactctctcttcttgaaagaggaggtattggatccataccatctgta
atggaactcttacatgtaattaattga
DBGET
integrated database retrieval system
