Citrus sinensis (Valencia orange): 102625278
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Entry
102625278 CDS
T02983
Name
(RefSeq) coatomer subunit beta-1-like isoform X1
KO
K17301
coatomer subunit beta
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cit04131
]
102625278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cit04147
]
102625278
Membrane trafficking [BR:
cit04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
102625278
Exosome [BR:
cit04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
102625278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
Coatomer_g_Cpla
Alpha_adaptinC2
TFIIE-A_C
Motif
Other DBs
NCBI-GeneID:
102625278
NCBI-ProteinID:
XP_052291758
LinkDB
All DBs
Position
1:join(461675..463777,464212..464733,464934..465019,465418..465622)
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AA seq
971 aa
AA seq
DB search
MLFSDNARTSNNRKKEKKKGSAKMERPHTLLIHYDKGTPAIAKQIVKDLQGRDGPAKVDA
MKKAIMLLLNGETLPQLLNTIVRFVLPSQDPMLQKLLLLYLEIIDIVKVDADAGGGTMNE
MYICQHLKNNLNNSNIYTRVATLRFICHLNDKHLDIIRELKSSVVGNLQHKHPYVRRNAI
LAVMTIDKLPQGQLLLVDAPETIEEVLSKEEDPSAKRSAFLMLSTCDQDRAINYLLSHVD
SVSGWGELLQMVVLELIRKVLVSRMDKGEKETYINIVKSLLNAPSTATAVAYECAGILVS
LSSKPTDIVAAANTYCQLLRSQSDNNVKLIALDRLIELKSSHRDIMVDLTMDLLRALNCR
NTDIQKKALQIVLELITERNINGVVLMLKNEAFKTQGHGGEFKNNGKYRQMLIQAIRICA
LKFPKVASTVDDLLMDFSGDNNVASAIDMLHSVREIIEMNHEVRVSIITRVLDNLYRIRA
SRVCSCALWTIGEYCRSLDEVENGIATIKHCLGELPFLPVSEEGEDTDSSEKVQQKMNSV
TVSSVLADASEPAFSDQGSLTWRNLRSFLLTGDFFLGAVVASTLTKLVLRLEGVQSSKVE
VNKASTQAVLIMVSMLQLGQSPVLPHPIDNDSYDRIVVCIRLLCSTGDNVRKIWLQSCRQ
SFVKMLSEKQLRESEELDAKAQISHAQPDDLIHFDSLKTMKGRSQLELEDMTPDDEKLET
GEFIKDGDGVNKLNRRIHQLTGFSDPVYAEAFVTVHRHDIVLDITIINRTKQTLQNFVME
LIIKGGLEIVELKPVEDPQNNTLAPESNMEIKVKLMVVSTDTGVICGHVVYGTSNGEKTV
VLSEICFDVGDYMSPAVCTDEAFRTLWAELEWKRKVDVDTEIQDEKEFLDHIIKLTNMKC
LTAPLDGNCGFLTANLYAKSVFGEDALVNVSIEKKNNGRLGGSIKIKSKSQGIALGLSNK
ISLKQKGKGGN
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttctgacaatgcacgaacttcaaataacagaaaaaaagaaaaaaaaaaagga
tctgcaaaaatggagaggcctcatactctgctcattcactatgacaaagggacgccagca
attgcaaaacaaatagtgaaagatcttcaaggccgcgatgggcctgcgaaagttgatgcc
atgaagaaagcaattatgcttttgttgaatggtgaaaccttacctcagctgcttaataca
atcgttagatttgttttaccttctcaggacccgatgttacaaaaattgttgcttttatat
ttggagatcattgacattgtaaaagtagatgcagatgctggcggtggcaccatgaatgaa
atgtatatttgccaacatcttaaaaacaatctcaacaattcgaatatatatactcgtgtt
gctactttgaggtttatttgccacttgaacgacaaacatttagatataattcgggagttg
aaatcttcagttgtgggaaatttgcaacataagcacccatatgttcggaggaatgctata
ttggctgtaatgacaatagataagcttccacagggtcagctgcttctggtggatgcaccc
gaaacaattgaagaggttctatcaaaagaggaggatccatcagccaagcgaagtgcattt
ctcatgctctctacttgtgatcaggatcgagcaattaattacctgttgagtcatgttgat
agtgtttctggatggggtgaattgcttcagatggttgtattggagttgattcggaaagtc
ttagtcagccgaatggacaagggggagaaggagacctatatcaatattgttaaatcattg
ttgaatgctccttcaactgcaactgcagttgcttacgaatgtgcagggatacttgtctct
ttgtcatctaaacccactgatattgtagctgctgctaacacctactgtcagcttcttcgt
tctcaaagtgacaacaatgtcaagcttattgcacttgaccggctaattgagctcaagtct
tcacacagggatatcatggttgatctgaccatggatctgctaagggcacttaactgtcgt
aatactgacattcaaaagaaagcgcttcaaattgtgctcgagttgataactgaaaggaat
atcaatggggtagttcttatgttgaagaacgaagcttttaagacccagggtcatggtggg
gagtttaagaacaatggaaagtataggcaaatgctcattcaagccattcgtatctgtgcc
cttaagtttccaaaagtggcaagcactgtggacgatctgctgatggacttctcaggggac
aacaatgttgcttccgctattgatatgcttcattctgttcgagaaataattgaaatgaat
cacgaagtgagggtctctattataaccagagtattggacaatctctatcggatcagagct
tcacgagtttgttcttgtgctctttggaccattggggagtattgccggtctcttgatgaa
gttgagaatggcatagcgaccatcaagcactgtctcggagagttgccatttttaccagtc
tctgaagaaggggaggatactgactcttccgagaaagttcagcagaaaatgaactcagtt
actgtttcttctgttcttgctgatgcctctgaacctgctttttccgatcaggggtcattg
acttggagaaatttaagatcatttcttctcactggtgattttttccttggggcagttgtt
gcttccaccctgacaaagctagttctgagattggaaggggtgcagtcatctaaagttgaa
gtgaataaagcatccactcaggcagtattgatcatggtctcaatgttacaattaggacaa
tctccagttctgccgcacccaattgataacgattcttatgataggattgttgtgtgcata
agattgctttgcagtactggtgacaatgtcaggaagatatggttgcagtcttgccgccag
agctttgtaaagatgctttcagagaagcagttaagggaatctgaggaattagatgctaag
gctcagatttctcatgcacagccagatgaccttattcactttgacagtctaaagaccatg
aaggggaggagtcagcttgagttagaagatatgacgccagacgatgaaaaacttgaaact
ggagagttcatcaaggatggagatggtgtaaataagcttaaccgccgtattcatcaactc
actggatttagtgaccctgtatatgctgaagcctttgttactgttcaccgccatgatatt
gtccttgacattacaattatcaaccgcaccaagcaaaccctccagaattttgtcatggag
ttgattatcaagggtggccttgaaattgttgagcttaaacctgttgaggatccccagaat
aacactttagcacctgaatcaaacatggaaataaaggttaaactcatggtggtctcaact
gacaccggagtaatatgcggtcatgtggtgtacgggacttcaaatggggagaaaacagtt
gttcttagtgaaatttgcttcgacgtcggggactatatgtctcctgcagtttgtacagat
gaagcttttagaaccctgtgggctgagctcgagtggaaacgcaaggttgatgttgacacg
gaaattcaagatgaaaaggaatttctggatcacataatcaaattaaccaacatgaagtgc
ctgactgcaccactagatggtaactgtggatttctgaccgcaaacttatatgccaagagt
gtgttcggtgaggatgcattggtaaatgtaagcattgagaaaaagaacaacggcagactc
ggtggcagcatcaaaataaagagcaagagccaaggcatagcacttggtctcagcaataag
atctctctcaagcagaagggaaagggaggcaattga
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