KEGG   Citrus sinensis (Valencia orange): 102627386
Entry
102627386         CDS       T02983                                 
Name
(RefSeq) protein RNA-directed DNA methylation 3 isoform X1
Organism
cit  Citrus sinensis (Valencia orange)
SSDB
Motif
Pfam: Spt5-NGN KOW Spt5_N
Other DBs
NCBI-GeneID: 102627386
NCBI-ProteinID: XP_006485320
LinkDB
Position
4:join(5568000..5568219,5569111..5569361,5569508..5569663,5569810..5569968,5570081..5570164,5571071..5571138,5571223..5571558,5571660..5571711,5571778..5571933,5572038..5572175,5572279..5572381,5572466..5572615,5572698..5572752,5572866..5572930,5573149..5573218,5574093..5574129,5574225..5574285,5574379..5577443)
AA seq 1741 aa
MATDKGKAVAVGKDAYGKRKRNDGSSGVKPHNRKRKNRSVLQFVEDAADVDYDDDDEEEV
GNESDNSGGFADDDFMEELFDAQPKVNNEMGQAHNLPFIPKEEEMDEEEFDKMMEERYKS
NKLIRYAEEDYEAKKMLEREYHMPCPEDPTIWKVKCMAGRERQSAFCLMQKFVDLQSLGS
KMQIISAFAVDHIKGFIFIEADKQCDINEACKGLSGIYYSRLAPVPKNEVSHLLSAQIKR
NEVSEGTWAYVKNGKYKGDLAQVVYANNARKRATVKLIPRIDLQALAAKFGGGVAMKKTD
SPAPRLISPSELEEFRPLIQYRRDRDTGKVFENLDGMMLKDGYLYKKVSIDSLSCWGVVP
SEEELLKFQPSESNESADLEWLSQLYGERKKKRTTIVGKGGDKGEGSSGSSLENSFELYE
LVCFGRKDFGLIVGMEKDDHYKILKEGSEGPAVVTVERRTLKNGPFDMKFTALDQSMKVI
SLNDTVRVSEGPSKDRQGIVKKIYRGILFIYDENETENGGYFCSKSQHCEKTKVEACEGK
GGGSGASGFEEFPSSPKSPLSPKRSWQAREQNTEFKRGDRDGMFAVGQTLRIRVGPLKGY
LCRVLAVRYSDVTVKLDSQQKILTVKGEHLAEVRGKSFITSTSDDQGSASFKPFDPLGAG
GGSGDWMSAATTSAEGDRWNAGGASAGRSSWPSFPVVGTSLHAESNPANAFGSGDNGANK
DEEDSAWGSKVNAIQNSSWGLAAAEGKNEDCWNKAAVKNIESNNGAYGGWGKEDAGSSLQ
DSQDNWGKNKDACDNQANWKKSDSWDKGKKIIGNSTSSWGDKTAEKNEPDSWGKGKDGSS
GSKSDWNSSALATENPTVSWGNASGGWTQQKGGNMDERSGWKKDDSGNQDQRSGWNKPKT
FGADVGSSWNKQDGICSSDVQDGGSSWAKQDGGSSWGKKNGGSLMGKQDGGSSWGKQDGG
SSLGKQDGGSSWGKQDGGSSLAKQDGGSSWGKQDEGSSWSKRDGGSSWGKQDGGSSLAKQ
DGGSSWGKQDSGSSLGKQDGGSSWSKQDGGSSWAKQDGGSSWAKQDGGSSWAKQDGGSSW
GKQDGGSSWGKQDGGSSWGKQDGGSSWGKQDGGSLWSKEPDQQHRKNGGSSWGNRDGGSS
WSKQADQQDNQEKPLESDGGRGSGGRWGQGGGRGGGQEVSDQYGRGSFDQGSEKGTGGMG
DQGNGCNRRDKGIDWNKKFNWNSGSSDGDGNNGSGGWGKKSNWNSGSSGAGESKDTDWNK
KSNLNCGSSDGDGNNSSGWDKKSNWNAGSSGDGESKDTDWNKKCNWNSGSNDGDGNNGSG
WGKKSNWNSGSNVAGESNDSNWAKKGNWNSGSDDANQESSWGKKQGNWNSGSRDGHQESS
WGKKSDWNSRSEDQPEPFNNRGSGNFRGRGGFRGRGDSDRGGFGGRGRTNRGGYGGRGRF
DREGFGGRGGSDRGGFGGRGSSDRGGFGGRGRGRRDQGGGWNNNDSGDYKSFDSSQGVKN
GGEWSRSNDGAGSWSQGGGTWKSGNSGASSQDGGWSSQGSGWNNSNTTNEVKGLSDQGGG
WNKGAGGSAQAGGWGSQGSGWSSGTSTGNRGSNDSSIANDVEGPNDQVVGRNKGSNGSAQ
SGGWGNQGSGWSSGTGSGNKGSNDSNISNKGPNDQGGGWNKGSGGSAQSGAWGNQGSGWN
GGTDSGNRGSNSDQPKSWNQSSVATDGGRSKDAGEGSSRGWGKTAGSSWEKGNDGSGKGG
W
NT seq 5226 nt   +upstreamnt  +downstreamnt
atggcgaccgacaaaggcaaggccgtcgccgtaggcaaggacgcttacggcaagaggaag
cggaacgacggaagcagcggcgtcaagcctcataaccgtaagaggaagaaccgcagcgtt
cttcagttcgtcgaagacgccgctgacgtggactacgacgacgatgacgaggaggaggtg
ggcaacgagagtgacaacagcggcgggttcgccgatgacgattttatggaagaattattt
gacgcacagccaaaagtgaataatgaaatgggacaagctcataaccttccattcattccc
aaagaggaggagatggatgaagaagaatttgacaaaatgatggaagaacgctacaaaagt
aacaaattgatcagatatgctgaggaggattatgaagctaaaaaaatgttggaaagagaa
tatcacatgccttgtcctgaggatccaactatctggaaagtcaaatgcatggctggacgt
gagaggcaatcagctttctgtcttatgcagaaatttgttgatttgcagtcacttggttcc
aaaatgcagataatttctgcatttgctgttgaccatataaagggttttattttcattgaa
gctgacaagcaatgtgatattaatgaggcatgtaaagggctttctggtatatattattct
agattggctccggttccaaaaaatgaagtctctcatctgctctctgctcaaattaaacgc
aatgaagtttctgagggtacatgggcctatgtgaagaatgggaaatacaaaggggatttg
gcacaggttgtgtatgcgaacaatgcccggaaaagagcaactgtgaagctgattccaaga
attgatttacaagcattggctgcaaaatttggtgggggagttgctatgaagaaaactgat
tctccagcaccaagattgatcagtcctagtgaacttgaggagttccgtcctctcattcaa
tataggcgtgaccgtgatacagggaaggtttttgagaatcttgatggcatgatgctcaag
gatggatatttatacaagaaagtatctatcgactcattgagctgctggggtgttgtgcct
tctgaagaggaactcctgaagtttcagccttctgagagcaacgaatctgctgatttggag
tggctttcacagctttatggtgaacgaaagaaaaaacgaaccacaatagttggaaaaggg
ggtgataaaggggagggctcatcaggatctagcctggagaatagctttgaactgtatgaa
cttgtgtgttttggccggaaagattttggtcttattgtaggcatggagaaagatgatcat
tacaagattctgaaagaaggttcagaagggcctgctgtagtaactgttgaacgacgcaca
ttaaaaaatggaccctttgatatgaagtttactgctttagatcaatccatgaaggtcata
tcccttaatgatactgtcagagtatcagaaggtccatctaaggataggcaaggtattgtt
aagaaaatctacagagggatcttgtttatatatgatgagaatgagacagaaaatggtggc
tatttctgctctaagtcccagcattgtgagaaaaccaaggttgaagcctgtgaaggaaag
ggtggtggatcaggtgcttctggttttgaagaattcccatcttctccaaagtctccttta
tcacctaagagatcatggcaagcgagggaacaaaacactgaattcaaacgaggagatagg
gatggaatgtttgcagttggtcaaacattaagaatccgagtgggtcctttgaaggggtat
ctctgtcgtgttctagctgtacgttattctgatgttactgtgaagcttgattctcagcaa
aagattcttacagttaagggtgagcatcttgctgaggttcgtgggaagagcttcatcacc
tctaccagtgatgatcaggggtctgcttcttttaaaccatttgatccactgggagctgga
ggcgggtctggagattggatgagtgcagcaacaacatcagcggagggtgataggtggaat
gctggaggcgcatctgctggaaggagttcttggcctagtttccctgttgttggaacttcg
cttcatgcagaatctaatccagcaaatgcatttggttctggtgataatggtgcaaataaa
gatgaagaagattctgcttggggttctaaggtaaatgcaattcagaattcatcctggggt
ttagcagcagctgagggaaagaatgaagattgttggaataaagctgctgtaaagaatatt
gaatctaataatggagcatatggtggatggggtaaagaagatgcaggaagctctttgcag
gattctcaagataactggggtaaaaacaaagatgcatgtgataatcaagctaattggaaa
aaatctgactcttgggacaaagggaagaaaattattggaaactccaccagtagttggggc
gataaaactgctgagaaaaatgaaccagactcatggggtaaaggtaaagatggttcgagt
ggaagtaaatcagactggaacagctcagcacttgccacagaaaatccaactgtaagctgg
ggaaatgcatctggaggctggacccaacaaaaaggaggaaatatggatgaaagaagtggc
tggaagaaagatgattcaggtaatcaggatcagaggagtggttggaacaaaccaaagacc
tttggtgctgatgtgggatcttcttggaataaacaagatggaatttgttcttcagatgtt
caagatggaggatcttcgtgggccaagcaggatggaggatcttcatggggcaagaagaat
ggaggatctttgatgggcaagcaggatggcggatcctcgtggggcaagcaagatggcggg
tcttcactgggaaagcaagatggaggatcttcatggggcaagcaagatggcgggtcttca
ctggcaaagcaagatggaggatcttcgtggggcaagcaggatgaaggatcttcctggagc
aagcgggatggaggatcttcatggggcaagcaggatggtggatcttccttggcaaagcaa
gatggaggatcttcgtggggcaagcaggacagtggatcttcactgggaaagcaggatgga
ggatcttcttggagcaagcaagatggaggatcttcatgggccaagcaggatggtggatct
tcatgggccaagcaggatggtggatcttcctgggcaaagcaggatggtggatcttcctgg
ggaaagcaagatggaggatcttcctggggaaagcaagatggaggatcttcgtggggcaag
caggatggtggatcttcctggggaaagcaagatggagggtctttatggagtaaagaacct
gatcaacaacataggaaaaatggaggatcatcatggggaaaccgagatggaggctcctcg
tggagtaaacaagctgatcaacaagacaatcaggagaagccattggaatctgatggaggc
cgtggatcaggtgggagatggggccaaggaggtggccggggaggtgggcaagaagttagt
gatcaatatggcagaggatcatttgaccagggttcagagaaaggaactggtggaatggga
gaccaaggaaatggttgtaaccgtagagacaagggtattgattggaataaaaaattcaat
tggaattctggatccagtgatggagatggaaataatggttctggtggttggggcaagaaa
agtaactggaactctggttcaagtggtgctggggagagcaaggatactgattggaacaaa
aaaagcaatttgaattgtggatctagtgatggagatggaaataatagctctggttgggac
aagaaaagtaactggaatgctggttcaagcggtgatggggagagcaaggatactgattgg
aacaaaaaatgcaattggaattctgggtctaatgatggagatggaaataatggttctggc
tggggcaagaaaagtaactggaactctggttcaaatgttgctggggagagcaatgactct
aactgggcaaaaaagggaaattggaactctggatccgatgatgctaaccaggaatctagt
tggggaaaaaaacaaggtaattggaactcaggatcaagagatggacaccaggaatccagt
tggggaaagaaaagtgactggaactcgagaagtgaagatcaaccggagccgttcaataat
aggggcagtgggaactttagaggtagaggaggatttagaggtagaggggattcggacaga
ggaggctttggtggtcgaggcagaaccaacagaggtggctatggaggtcgaggcagattt
gacagagaaggatttggtggtagagggggttcagataggggaggctttgggggtaggggt
agttcggatagaggaggatttggaggtagaggtcgtggaaggagagatcaaggtggtggt
tggaacaataatgactcaggtgactacaagtcttttgacagtagccaaggggtcaagaat
ggtggtgaatggtctagaagtaatgatggtgctggcagttggtcccaaggaggaggcact
tggaaatctggaaatagtggagctagcagtcaagatggtggttggagcagccagggttcg
ggctggaataattccaacactacaaatgaagtgaaaggactcagtgaccaaggtggtggc
tggaacaagggagcaggtgggagtgctcaagccgggggctggggtagccaaggatcgggt
tggagcagtggaacaagtacaggaaacagaggcagtaacgattctagcattgcgaatgac
gttgaaggacctaatgaccaagttgttggccggaacaagggatcgaatgggagtgctcaa
tcaggaggctggggtaaccaaggatcaggttggagcagtggaacgggttcaggaaacaaa
ggcagtaatgattctaacatttcaaacaaaggtcctaatgaccaaggtggtggctggaac
aagggatctggtgggagtgctcaatctggggcctggggtaaccaaggttcaggctggaat
ggtggaacagattcaggaaaccgaggcagtaatagtgatcaaccgaagtcctggaatcaa
tcaagtgtagccactgatggaggtcggtcaaaagatgctggagaaggaagcagcagaggt
tggggtaaaacagctggaagctcttgggagaagggaaatgatggaagtggcaaaggaggg
tggtag

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