KEGG   Citrus sinensis (Valencia orange): 102628046
Entry
102628046         CDS       T02983                                 
Name
(RefSeq) DnaJ homolog subfamily C GRV2 isoform X1
  KO
K09533  DnaJ homolog subfamily C member 13
Organism
cit  Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:cit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cit03041]
    102628046
   03110 Chaperones and folding catalysts [BR:cit03110]
    102628046
Spliceosome [BR:cit03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    102628046
Chaperones and folding catalysts [BR:cit03110]
 Heat shock proteins
  HSP40 / DNAJ
   102628046
SSDB
Motif
Pfam: RME-8_N GYF_2 DnaJ SYCE1
Other DBs
NCBI-GeneID: 102628046
NCBI-ProteinID: XP_006475752
LinkDB
Position
1:complement(join(5397432..5397632,5398365..5398433,5399043..5399166,5399580..5399704,5400005..5400472,5400551..5400894,5400983..5401328,5401433..5401933,5402943..5403237,5404488..5404832,5404934..5405157,5405622..5406107,5406247..5406639,5407049..5407189,5407876..5408238,5408721..5410958,5411272..5411334,5411413..5411514,5412030..5412238,5412344..5412431,5412641..5412871,5413612..5414034))
AA seq 2592 aa
MDPVNTPSNSAPHPPPEETEYLARYLVVKHSWRGRYKRILCISNATIITLDPNTLAVTNS
YEVASDFEGATPIIGRDDNANEFNISVRTDGRGKFKAFKFSSRFRASILTELHRIRWVRL
NAVAEFPVLHLRRRNSEWVAYKLKVTYVGVELTDLRSGDLRWCLDFRDMDSPAIVLLSDA
YGKRSETGGFVLCPLYGRKSKAFQAAPGTTNSAIVSSLTKTAKSMVGLSLSVDSSQPLSV
AEYIKRRAKEAVGADETPCGGWSVTRLRSAAHGTLNVSGLSLGIGPKGGLGEHGGAVSRQ
LILTRVSLVERRPDNYEAVIVRPLSAVSSLVRFAEEPQMFAIEFNDGCPIHVYASTSRDS
LLAAVRDVLQTEGHYPVPVLPRLTMPGHRIDPPCGVVRMQVRKQRPVADMESTSMHLKHL
AAVAKDAVAESGQVSGSRAKLWRRIREFNACIPYSGVPPSVEVPEVTLMALITMLPSTPN
LPPESPPLPPPSPKAAATVMGFVACLRRLLTSRTAASHVMSFPAAVGRIMGLLRNGSEGV
AAEAAGLIAILIGGGSGDTNMLTDSKGEQHATMMHTKSVLFSQQGYLIVLVNRLRPMSVS
PLLSMAVVEVLETMICEPHSETTQYTVFVELLRQVAGLRRRLFALFGHPAESVRETVAVI
MRTIAEEDAIAAESMRDAALRDGALLRHLLHAFFLPAGERREVSRQLVALWADSYQPALD
LLSRVLPPGLVAYLHTRSDGVLSEDANLEGSLTSRRQRRLLQQRKGRPGRGIASQEHSVP
YVNNVEANDPTRQKTSAFRGPGSHQTSNLDPSSGQASAFQSPAARSGENLVSDIPYMGFS
QNDHPAVVATADSPLRGVHESLDPKATSSVDSDANAVGFQNTDIPAPAQVVVESTPVGSG
RLLLNWPEFWRAFSLDHNRADLVWNERTRQELREALQAEVHKLDVEKERTEDIVPGGATL
ETMTGQDSVPQISWNYPEFSVSYPSLSKEVCVGQYYLRLLLESGSSGRAQDFPLRDPVAF
FRALYHRFLCDADIGLTVDGAIPDELGASDDWCDMGRLDGFGGGGGSSVRELCARAMAIV
YEQHYTTIGPFEGTAHITVLLDRTDDRALRHRLLLLLKVLMKVLANIEACVLVGGCVLAV
DLLTVVHETSERTAIPLQSNLLAATAFMEPFKEWMFIDKDGAQVGPVEKDAIRRFWSKKA
IDWTTRCWASGMLDWKKLRDIRELRWALAVRVPVLTPTQVGEAALAILHNMVSAHSDLDD
AGEIVTPTPRVKWILSSSRCLPHIAQAMLSGEPSIVEAAAALLKAVVTRNPKAMIRLYST
GAFYFALAYPGSNLYSIAQLFSVTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLY
VLERSGPAAFSAAMVSDSDTPEIIWTHKMRAENLIRQVLQHLGDFPQKLSQHCHSLYEYA
PMPPVTYPELKDEMWCHRYYLRNLCDEIQFPNWPIVEHVEFLQSLLVMWREELTRRPMDL
SEEEACKILEISLDDVSSDDSHKSYSSEEMSNISKKIENIDEEKLKRQYRKLAMKYHPDK
NPEGREKFLAVQKAYERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVLEPFKYAGYP
MLLNAVTVDEDDNNFLSSDRAPLLVAASELLWLTCASSSLNGEELVRDGGIQLLSTLLSR
CMCVVQKTTPAMEPSAVIVTNVMRTFSVLSQFESARTEVLQFSGLVQDIVHCTELELVPG
AVDAALQTIAHVSVSSELQDALLKAGALWFLLPLLLQYDSTAEKSDTNESHGVGASVQIA
KNMHAVRAAQALSRLSGLCSNGISIPYNEAAASALRALLTPKLASLLKDQIPKNLLSKLN
TNLESPEIIWNSSTRAELLKFVDQQRASQSPDGSYDLKDSNGFLYEALSKELYVGNVYLR
VYNDQPDFEITEPEAFCVALIDFISYLVHNQSATKSDVQGEESLDGLSSKIVQDKLSLDP
SSSKTFELPSDATDSSMNERKVNDESLAVSDRKVTGKEDSVMIKNLQFGLTSLQNILTSN
PNLASIFSTKEKLLPLFECFSVPFAPDSNIPQLCLNVLSLLTTCASCLEAMVADGSSLLL
LLQMLHYAPACREGVLHVLYALASTPELAWAAAKHGGVVYILELLLPSQQEIPLQQRAAA
ASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSALEQTTETPELVWTPAM
AASLSAQISTMASDLYREQMKGRVVDWDVPEQASAQQEMRDEPQVGGIYVRLFLKDPKFP
LRNPKRFLEGLLDQYLSSIAATHYDTQAIDPELPLLLSAALVSLLRVHPALADHVGYLGY
VPKLVAAVAYEGRRETMSTEEVKNGNSEADRTYESDDGSAQPVQTPQERVRLSCLRVLHQ
LAASTTCAEAMAATSTGTPQVVPILMKAIGWQGGSILALETLKRVVVAGNRARDALVAQG
LKVGLVDVLLGLLDWRAGGRNGLSSQMKWNESEASIGRVLAIEVLHAFAAEGAHCSKVRD
ILSASDVWSAYKDQKHDLFLPSNAQSAAAGVAGLIESSSSRLPYALTAPPQSSHPRPPST
AFDSNGMHDQLS
NT seq 7779 nt   +upstreamnt  +downstreamnt
atggaccccgttaatactccttccaattctgccccgcatccgcctccggaagagaccgag
tacctcgcccgttacttggtcgttaaacactcgtggcgcggccgttacaagaggattctt
tgtatctctaacgctaccatcatcacgttggaccccaacacgcttgccgttaccaattcg
tatgaagtggcgtccgatttcgaaggtgccacgccgatcatcggccgcgatgataatgcg
aatgagtttaatataagcgttaggactgatgggcgtggcaaatttaaggcgtttaagttt
tcatcaaggtttagggcgagtatcttgaccgagttgcatagaattaggtgggttagactc
aatgctgtcgcggaatttccagtgcttcatcttcggagacggaactcggaatgggttgct
tataaattgaaagttacttatgttggagttgaacttactgatttacgatctggagacctg
aggtggtgcttggactttagagacatggattcacctgccatcgttctattaagtgatgcc
tatgggaagagaagtgaaactggaggttttgttctttgtcctttatatgggagaaaatct
aaagctttccaggctgctccagggaccaccaattctgctatcgtttcaagtttgactaaa
actgccaaatcgatggttgggttgtcactatctgtggacagttcccagcccctctctgtg
gcagagtacataaagagacgagccaaagaagctgttggggcagatgaaaccccttgtgga
ggttggtcggtgacgaggttgcgctctgctgctcatggaacgttaaatgtttctggactg
agtttgggaattggccctaaaggaggccttggggagcatggtggtgctgtttcacgtcaa
ctcatccttacaagggtctcacttgttgaaagacgcccagataactatgaagctgttatt
gttcgccctttatctgctgtaagctcgctcgttcgatttgcagaggagccccagatgttt
gctattgaattcaatgatggatgccccatccatgtatacgcaagcacatcacgtgacagc
ttacttgctgcagttcgggatgttttgcagacagaaggtcattaccctgtgccagtttta
ccaagattgacaatgcctggtcatcggattgatccaccctgtggagttgttcgcatgcaa
gtcagaaagcagcgtcctgttgctgatatggaaagtacatccatgcatttgaaacacttg
gcagcagttgccaaagatgctgttgctgaaagtggccaagtttctggttcaagagctaag
ctatggcgtagaatacgggagttcaatgcttgtattccatacagtggagtgcctcctagt
gttgaagtgcctgaggtaactttgatggcattgattacaatgcttccatctaccccaaat
cttcctccagagtcccctcctttaccacctccttcacctaaagctgctgcaaccgtgatg
gggtttgttgcatgtttgcgtagactacttacttcaagaactgcagcgtcacacgtgatg
tcttttcctgctgctgttggaagaataatgggtttgctgagaaatggatctgagggtgtg
gctgctgaagctgcagggctgattgctatacttattggcggtggttctggggatacaaat
atgttaactgattctaaaggagagcagcatgccacaatgatgcacacaaagtctgtatta
ttctctcaacagggctatcttattgtcctggtcaaccgtctgaggcctatgtcagtatcc
cctttgctgtcaatggctgttgttgaagttcttgagacaatgatatgtgaaccacatagt
gaaaccacccaatacactgtttttgttgaattgttgcgccaagttgctggtttgcggcgt
cgtttatttgcactttttggacatcccgctgaaagtgtaagggaaacagttgctgttatc
atgcgtactattgcagaagaagatgcaattgctgcagagtcgatgcgcgacgctgctttg
cgtgatggtgctttgctgaggcatttgttgcacgcgtttttccttcctgctggcgagcga
cgtgaggtgagtcgacaacttgtagctctttgggcagattcttatcaaccagctctagat
ttattgtctagagtgctacctcctgggcttgttgcttatttgcacacacgttctgatgga
gttttgtctgaagatgcaaatttagaaggatcattgaccagtaggagacagagacgcttg
ctccaacagaggaaaggccgtcctggtagaggaattgcatctcaagagcattctgtgcct
tatgttaataatgttgaagccaatgacccaacaaggcagaaaacaagtgcttttagaggg
ccaggtagccatcaaacatctaatctagatccgagttctggacaggcttcagccttccaa
tctccggctgctcgttctggtgaaaatttggtcagcgatataccgtatatgggcttttcc
caaaatgatcatcccgctgttgttgccacagctgattctccgttaaggggtgtacatgaa
tcactagatccaaaagctacaagttcagttgattctgatgctaatgcagttggtttccag
aacacagacattccagctcctgctcaggttgttgtagagagcacacctgtaggttctggt
cggctgcttcttaattggcctgaattttggcgagcttttagccttgatcacaatcgtgca
gatttagtatggaatgagcgtactaggcaggagctgagggaggctttgcaggctgaagtt
cataagctagatgtcgagaaagagcgtactgaggatatagttcctggaggtgctaccctt
gagactatgactgggcaagatagtgtgccacagatttcttggaattatcctgagttttct
gttagttatcctagcttgtccaaagaagtttgtgtgggtcaatattacttacgattgttg
cttgagagtggcagtagtggcagggcacaggattttccattgcgtgatcctgttgccttt
tttagagcactctatcatcgtttcttatgtgatgcagacataggcctaacagtagatggt
gcaatacctgatgagttgggtgcatctgatgattggtgtgatatgggaagattggatggt
tttggaggtggcggaggttcttcagttagggagctatgtgctagggcaatggcaattgta
tatgaacagcattatactacaattggaccttttgaaggtactgcacatattacagttctt
ttagataggacggacgatagagctttgagacaccgtcttcttctccttctgaaggtttta
atgaaggttttagcaaatatcgaggcttgtgttttggttggagggtgtgtattagctgtt
gatctgctgacagtggtgcatgaaacttcagagcgaactgctattcctttacagtcaaat
ttactagcggctacagcattcatggaaccatttaaggaatggatgtttattgacaaggat
ggagcacaagtaggaccagtggagaaggatgccattagaagattttggtcaaagaaagct
attgattggacaactaggtgttgggcttctgggatgttagattggaaaaagttacgtgat
atccgtgaacttcgttgggcgcttgctgttcgggttcctgttctcacaccaactcaggta
ggtgaggcagcattagccatattgcataacatggtatctgcacattcagatttggatgat
gctggagagatagttactccaactccgagggtaaagtggatcttatcaagctcacgctgc
cttccgcatattgcccaggctatgctttctggggaaccaagtatcgtagaggctgctgcg
gctttgctgaaggctgttgtcacaagaaatcccaaggccatgatacgtctatacagcact
ggtgccttctattttgctctagcataccctggatcaaatctctattcaattgctcaactc
ttttctgtgactcacgtgcatcaagcatttcatggtggggaagaagctgcagtttcgtct
tcactgcctctggcaaaacgtagtgtattgggagggcttctcccagagtccttgttgtat
gtgttggagcgtagtggtccagctgcattttcagcagcaatggtatcagattctgacact
cctgagatcatatggacacacaaaatgcgagcagaaaatctgattcgtcaggttttgcag
catcttggtgattttccccagaaattgtcacagcactgccattctttatatgagtatgct
ccaatgccaccagtgacataccctgagctcaaagatgaaatgtggtgtcaccgttattat
cttcggaacttatgtgatgagattcagtttccaaattggccaattgttgaacatgtggag
tttctacagtcattacttgtgatgtggcgtgaagagttgacacgtagacctatggatctc
tcagaagaagaagcttgtaaaatattagagatatccctggatgatgtatccagtgatgat
tcccataagagctattcttctgaggagatgtctaatatatccaagaagattgagaacatt
gatgaggagaagctcaaacgccaatataggaaacttgcaatgaaataccatcctgacaaa
aatcccgaaggaagggagaagtttcttgcagtacagaaagcttatgagcgccttcaggcc
accatgcaaggcttgcaaggtccacagccttggaggttattgcttttattgaaaggacaa
tgcatcttatacagacgatatggagatgtactggaaccatttaaatatgctggctatccg
atgttgctcaatgcagttactgtggatgaggatgataacaatttcctttcctcagataga
gctcctcttctcgttgcagcttctgagcttctctggctgacgtgtgcatcttcttcgttg
aatggtgaggagcttgtgagagacggtgggattcaacttctttcaactcttctttcccgc
tgcatgtgtgtggttcagaaaactactcctgctatggaaccttcagccgtcattgtcaca
aatgtgatgcgaacgttttctgttttaagtcagtttgagagtgccaggactgaggtgctt
caattttctggattagttcaagacattgtacactgcactgaacttgagcttgttcctgga
gctgttgatgctgcacttcaaactattgctcatgtatctgtgtcatccgagcttcaggat
gcattgctgaaggctggtgcgctatggttccttttaccgttattgcttcaatatgactca
actgccgaaaaatcagatacgaacgagtcacatggtgttggtgccagtgttcaaattgca
aaaaatatgcatgctgtaagagcggcccaggccctttctaggcttagtggtttgtgctct
aatgggatttcaataccttataatgaggctgcagccagtgctctcagagcattgttgact
cctaagcttgcaagtttattgaaagatcagatacccaaaaacctgctttccaaattaaac
acaaacttggagtctccagagattatttggaactcatcaactcgagcagaattgctgaaa
tttgtagatcagcaacgtgcaagccaaagtcctgatggttcatatgatctgaaggattca
aatggctttttatacgaggcattatcaaaggaactttatgttggcaatgtttacttgagg
gtctataatgatcagcctgattttgagatcactgaaccagaagccttctgtgttgcttta
attgattttatatcgtatcttgtgcacaatcaatctgctacaaagtcagatgtccagggt
gaagaaagtctggatggcttatcctcgaagattgttcaggataaacttagtcttgatccc
tcatcctcaaagacgtttgagcttccaagtgatgctactgattcatcaatgaatgaacgg
aaagttaatgatgagtccttagccgtatctgacagaaaagtgactggcaaggaagattct
gtaatgattaaaaatcttcagtttggtttgacctcacttcagaacatattgacaagcaat
ccaaatttggcatccatattttctaccaaagaaaagctattgcctctttttgaatgcttt
tctgtgccatttgcaccagacagcaacattcctcagctttgcctgaatgtgctgtctctc
ttgacaacatgcgcttcctgcttggaggctatggtggcagatggatctagtcttctcctt
ttattacagatgcttcattatgcaccagcttgtcgtgagggggttcttcatgttctttat
gctttggcaagcacgccagaacttgcttgggcagctgccaagcatggtggagtggtttac
attcttgaacttctcctgccttcacaacaagaaattccattgcagcaaagagctgcagca
gcctctttattggggaagcttgttgggcaaccaatgcatgggcctagagttgctataaca
ctagcaaggtttctcccagatggtctggtatcagttataagagatggtcctggcgaagct
gttgtatcagcacttgaacagactacggaaaccccagaacttgtatggacaccagcgatg
gcagcttctctatctgcacagatttcaacgatggcatctgacctatatcgtgaacaaatg
aaaggacgtgttgttgattgggatgtacctgagcaggcatctgcacagcaagaaatgaga
gatgagcctcaggttggcggaatttatgtccggctgtttcttaaagatccaaaatttcct
ttgagaaatccaaagagattcttggaaggactgctggatcagtatttgtcatcaattgct
gccacacattatgacacccaagctattgacccagagcttcctttgcttctctctgctgct
ttggtttcattattgcgagtacaccctgctcttgcagaccacgtcggatatcttggttat
gtgcccaaacttgtggctgctgtggcttatgagggaagacgagaaaccatgtcaacggag
gaggtgaaaaatggtaactctgaagcagatagaacatatgaatcggatgatggatctgcg
cagcctgtacaaactcctcaagaacgtgtccgccttagttgtttgcgggtcttgcatcaa
cttgctgctagtactacctgtgcggaagctatggctgcaacaagtacaggaacacctcag
gttgttccaattctaatgaaagctataggatggcaaggtggaagcattttagctcttgag
acattgaaacgtgttgttgttgctggaaatcgagctagggatgcacttgtagcccaaggc
cttaaggttgggcttgttgatgttcttcttggccttcttgactggagagctgggggaagg
aatgggcttagctctcagatgaagtggaatgaatctgaagcttctattggcagagtgctt
gctattgaggttttgcatgcatttgcagcagaaggagctcattgttccaaagtacgtgac
atattgagtgcctcagatgtttggagtgcttataaagaccagaagcatgatcttttcctc
ccttcaaatgctcagtctgcggcagctggagttgctggtctgattgaaagttcctcgtct
cgactaccttatgctcttactgctccaccacaatcttctcatccgagaccaccatcaact
gcgtttgattcaaatggaatgcatgatcagctttcatag

DBGET integrated database retrieval system