Citrus sinensis (Valencia orange): 102628811
Help
Entry
102628811 CDS
T02983
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102628811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102628811
Enzymes [BR:
cit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102628811
Spliceosome [BR:
cit03041
]
Complex A
U2 snRNP components
U2 related factors
102628811
Complex B
102628811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
102628811
NCBI-ProteinID:
XP_006493760
LinkDB
All DBs
Position
9:complement(354288..357620)
Genome browser
AA seq
1110 aa
AA seq
DB search
MAHSHRDRDREKEKEKHREKSRRSEREQSTDSDEDKHDKEKEKDKHRDRDRRRDRDRDRE
KEREEKRERAREKEREREKRDREREDRERERERERERRERDREREKRERERDRDKEKDRE
RKSRDREKRRKVESDDSDEDKDRDRKRRRRHDDDHKERVRERSLSRSNRHRDENDESPRE
KLVEDDSDKKEKKTREEELEDEQRKLDEEMEKRRRRVQEWQELKRKKEESERENRGDANV
EEPKAGRNWTLDREDSDDEEVPQTGKSETDMDADEEPKPSENQVGDAMLVDSDGGSAAPA
LQIGAAEDEDIDPLDAFMNSMVLPEVEKLQNTVEPSFTDGNNVESKKMDRKGDRRSNGEQ
PKKSSNKSLGRIIPGEDSDSDYGDLENDEKPLEDEDDDEFMKRVKKTKAEKLSIVDHSKI
DYQPFRKNFYIEVKEIARMTPEEVSAYRKQLELKIHGKDVPKPIKTWHQTGLTSKIMETI
RKLNYEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVAAGDGPV
GLIMAPTRELVQQIHSDIRKFAKVMGVRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMI
DILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQV
EILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWYEKGKILIFVH
SQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSVAARGLDVKE
LELVINFDAPNHYEDYVHRVGRTGRAGRKGCAITFISEEDAKYSPDLVKALELSEQVVPD
DLKALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEKRKAAKKAQAKEYGFEEDKSDS
DDEDEGIRKAGGDISQQDALAKISAIAAASKASASMPTPISAAQLLPNAGLPISLPGVLG
LSIPGAAPTVSATGLPVVPNDGAARAAALAAAINLQHNLAKIQADAMPEHYEAELEINDF
PQNARWKVTHKETLGPISEWTGAAITTRGQYFPPSRIAGPGERKLYLFIEGPTEQSVKRA
KAELKRVLEDFTNQALSLPGGAQPGRYSVV
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggcacattcccatcgtgaccgtgatagggaaaaagagaaggagaaacacagggagaag
agtaggcgctctgagagagagcagagcactgattctgatgaggataagcatgataaggag
aaggagaaggataagcatagagacagagacaggaggagagatagagatagggatagggag
aaggagagagaggagaagagggaaagggcaagagaaaaagaaagagagagggagaagagg
gatcgtgaacgtgaagatagagagcgggagagagagagagaacgggaaaggagggaacgg
gacagagagagggagaagagggagcgtgagagagatagagacaaggaaaaagatagggaa
aggaaatcaagggatagggagaaacgccgcaaagttgaaagtgatgatagtgatgaagac
aaggaccgtgatcgaaagcgtcgtaggagacatgatgatgatcataaggagagagttcgc
gaacggagtcttagccggtcaaacaggcatagggatgaaaatgacgagagcccaagggaa
aaactggttgaggatgattctgacaagaaagagaagaaaacccgagaagaagaactagag
gatgaacagcggaagctggatgaggaaatggaaaagaggagaaggagagttcaggagtgg
caagagttgaaaaggaagaaggaggaatccgagagagaaaatcgtggagatgcaaatgtt
gaggagcccaaggctgggaggaactggacccttgatcgagaagattctgatgatgaagaa
gtaccccaaacaggaaaatctgagacagatatggatgcagatgaagagcccaagccttct
gaaaaccaagttggagatgcaatgttggtagactctgacggtggttcagctgctcctgct
ttgcaaattggggctgctgaggatgaggatattgatccacttgatgctttcatgaactct
atggtgttacctgaagttgagaagctacaaaataccgtggaaccttcgttcaccgatggt
aataatgtggagtcaaagaagatggatcgtaagggtgataggaggagtaatggtgaacag
ccaaagaaaagttccaataagtcacttgggagaataattcctggcgaagattctgattca
gattatggggacctggagaatgatgagaagcctctagaagatgaagacgatgatgaattc
atgaagagggtgaaaaagacaaaagccgagaaattatccattgttgaccactcaaagatt
gattatcagcctttcaggaagaacttttatattgaagtaaaggagatagcaagaatgact
cctgaagaggtctctgcatataggaaacaactggagttgaagatacatggaaaggatgtg
cccaaaccaattaaaacctggcatcaaactggtcttacaagcaaaattatggagacaata
aggaagcttaactatgaaaagcccatgcctatccaagcgcaggcgttaccagttattatg
agtggtcgagactgcatcggcgttgcaaaaactggctcagggaaaacccttgcatttgtg
ctgccaatgttgaggcatatcaaggaccaaccgcctgtagcagctggggatgggccagtt
gggctgataatggcaccaactagggagcttgttcagcagatccacagtgatatcaggaag
tttgcaaaggtaatgggtgtcagatgtgtgcctgtctatggtggttctggtgttgcccaa
caaatcagtgaattaaaacgtgggactgaaattgttgtttgtactccaggtcgaatgatt
gatatactttgcacaagtggagggaaaattacaaatttgagaagagtaacctatttggtc
atggatgaagcagatcgaatgtttgacatgggctttgaacctcagatcactcgaattgtt
caaaatattaggccagatcgccaaactgtcctcttttctgctacttttcctcgtcaggtt
gaaattttggcccgtaaggtgttgaacaaacctgtcgagatacaggttggtgggagaagt
gtcgtaaacaaagatataactcagttggttgaggtgaggccagaaagtgacaggttcttg
agacttttggaacttctaggtgaatggtacgagaaggggaaaattttgatatttgtccac
agtcaggaaaaatgtgatgctttgttcagggatttgcttaagcatggttatccttgcctt
tcgcttcatggggcgaaggatcagactgatcgtgagtcaaccatttctgatttcaagagc
aatgtctgcaatttgttgattgctactagtgttgcagctaggggtttagatgtaaaggag
cttgaactagtaatcaactttgatgcaccaaaccactatgaagattatgttcatcgcgtt
ggtaggactggaagagctggtcgaaaaggctgtgccattacatttatctctgaggaggat
gcaaaatattctccagatcttgtaaaggcattggaactatctgagcaagttgttcctgat
gacctgaaagctcttgctgatagtttcatggctaaagtgaatcaggggcttgagcaagcc
catggaactggttatggtggaagtggttttaaatttaatgaagaggaagatgagaagagg
aaagcagcgaagaaagctcaggcaaaagaatatggctttgaggaagacaagtcagattct
gatgatgaagatgaaggaatcaggaaggcaggtggtgacatctcacagcaagatgccctt
gctaagatctcagctattgctgctgcctccaaggcgtcagcttcaatgccaactcctatt
tctgccgctcaactgcttccaaatgctggactacctatttctctgcctggtgtacttggc
ctatcaattcctggagcagcaccaactgtctctgcaaccgggctgcctgtggtaccaaat
gatggggcagctcgggcggcagcattagcagctgccattaacttgcagcataatctggca
aagattcaagctgatgcaatgcccgaacattatgaagcagaattggagattaatgatttt
ccacagaatgctcgatggaaggttacgcacaaggaaactttgggtccaatttcagaatgg
actggagctgctattaccacaaggggtcaatatttcccacctagccggatcgctggccca
ggagagcgcaagctttacttgttcattgagggccctactgaacagtccgtcaagagagct
aaagctgagttaaaacgtgttttggaagacttcacaaatcaggcactatcacttcctggt
ggagctcaaccgggcagatactcggttgtataa
DBGET
integrated database retrieval system
