Citrobacter sp. XT1-2-2: M4I31_15715
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Entry
M4I31_15715 CDS
T09034
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
cix
Citrobacter sp. XT1-2-2
Pathway
cix03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cix00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M4I31_15715 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cix03400
]
M4I31_15715 (uvrB)
DNA repair and recombination proteins [BR:
cix03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M4I31_15715 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M4I31_15715 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
SBDS_domain_II
UB2H
AAA_30
AAA_22
IF2_N
DUF4686
Motif
Other DBs
NCBI-ProteinID:
UQX57880
LinkDB
All DBs
Position
complement(3286333..3288354)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTISR
YTIYPKTHYVTPRERIVQAMEEIKVELADRRKNMLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDDVVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRTRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITASMARAIGETERRREKQQRYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGKGKSRAGAKSDVVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAATIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactaaattccgcttttaaaccctctggcgatcagcctgaggcg
atacgtcgcctggaagaaggtctggaggacggtctggcgcatcagacgctgctgggggtg
acgggatcggggaaaacattcaccatcgcgaatgtgattgcggacctacagcgtcctacc
atggtgctggcgcctaacaagacgcttgccgcgcagctatatggcgagatgaaagagttc
tttccggaaaacgcggtggaatattttgtctcctactacgactattatcagccggaagct
tacgtaccgagttctgataccttcatcgagaaggatgcctcggtcaacgaacacattgag
cagatgcgtctgtcggcgaccaaagcgctgctcgaacgtcgggatgtcgttgtggtggcg
tcggtttccgccatttatggtttgggcgacccggacctgtatctgaaaatgatgctgcat
ctgacggtggggatgatcattgaccagcgcgcgatcctgcgtcgtctggcggagctgcaa
tatacccgtaacgatcaggcattccagcgcgggaccttccgcgtgcgcggtgaagttatc
gacattttcccggctgaatccgacgacattgcgttgcgcgtggaactgttcgatgaggaa
gtcgagcgtttgtcgctgtttgacccgcttaccgggcaggttgaatcgaccatttcccgc
tataccatctacccgaaaacgcactacgtcacgccgcgcgaacgtatcgtgcaggcgatg
gaagaaattaaagtcgagctggcagaccgccgtaaaaacatgctggcgaataacaagttg
ctggaagagcagcgcttaagccagcgtacacagttcgatctggaaatgatgaacgagctg
ggttattgctcggggattgaaaactattcccgctatctgtccggacgcggtccaggcgag
ccgccgccgacgttgtttgattacctgccggctgatggtctgctggtagtggatgaatcc
cacgtcactatcccgcaaattggcggtatgtaccgtggcgaccgggcgcgtaaagagacc
ctggtcgaatacggattccgtttgccctcggcgctggataaccgtccgcttaaatttgaa
gagttcgaggcactggctccgcagaccatctacgtctcggcgacgccggggaactatgag
ctggagaaatccggtgatgacgtggttgatcaggtagtacgaccgaccggcctgctggat
ccggtgatagaagtgcgtccggtggcgacgcaggttgacgatctgctgtcggagatccgc
acgcgtgcggcgattaacgaacgtgtgctggtcaccacgcttaccaaacgcatggcggaa
gacctcaccgaatacctcgaagagcacggcgagcgggtgcgttatctgcactcagacatc
gataccgtggaacgtatggaaatcattcgtgacctgcgcctgggcgagtttgacgtgctg
gtgggtatcaacctgttacgtgaggggctggacatgcctgaggtctcgctggtggcgatt
ctggacgcagacaaagaagggttcctgcgctctgaacgctcacttatccagaccatcggt
cgcgcggcgcgtaacatcaacggcaaggctatactctacggcgataaaattaccgcctcg
atggccagggcgattggtgaaactgaacgtcgtcgcgagaagcagcagcgctataacgaa
gagcacggtattacgccgcaggggctgaacaagaaagtggtcgatattctggcgctgggt
cagaatattgcgaagaccaaggcgaagggcaaagggaagtcacgtgcgggtgcgaagtct
gacgttgttgaactggatatgacgccaaaagccctgcagcaaaagattcacgagttggaa
gggcagatgatgcagcatgcgcagaatctcgaatttgaagaggctgcgacgatccgcgat
cagttgcatcagctgcgtgagttatttattgcggcatcgtaa
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