Callithrix jacchus (white-tufted-ear marmoset): 100393344
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Entry
100393344 CDS
T03264
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X5
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjc01002
]
100393344 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjc04121
]
100393344 (USP47)
Enzymes [BR:
cjc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100393344 (USP47)
Peptidases and inhibitors [BR:
cjc01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
100393344 (USP47)
Ubiquitin system [BR:
cjc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
100393344 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
CP2
Motif
Other DBs
NCBI-GeneID:
100393344
NCBI-ProteinID:
XP_002755100
Ensembl:
ENSCJAG00000010537
UniProt:
U3CFT3
LinkDB
All DBs
Position
11:74424294..74570774
Genome browser
AA seq
1287 aa
AA seq
DB search
MVPGEENQLVPKEAPLDHTSDKSLLDANFEPGKKNFLHLTDKDGEQPQMLLEDSSAGEDS
VHDRFIGPLPREGSVGSTSDYVSQSYSYSSILNKSETGYVGLVNQAMTCYLNSLLQTLFM
TPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFGWDSSEAW
QQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIP
LVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTL
QLKRFDFDYTTMHRIKLNDRMTFPEELDMSTFIDVEDEKSPQTESCTDSGAENEGSCHSD
QMSNDFSNDDGVDEGICLETNSGTEKISKSGLEKNSLIYELFSVMVHSGSAAGGHYYACI
KSFSDEQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLIYRLKDPAR
NAKFLEVDEYPEHIKNLVQKERELEEQEKRQREIERNTCKIKLFCLHPAKQVMMENKLEV
HKDKTLKEAVEMAYKMMDLEEVIPLDCCRLVKYDEFHDYLERSYEGEEDTPMGLLLGGVK
STYMFDLLLETRKPDQVFQSYKPGEVMVKVHVVDLKAESVAAPITVRAYLNQTVTEFKQL
ISKAIHLPAETMRIVLERCYNDLRLLSVPSKTLKAEGFFRSNKVFVESSETLDYQMAFAD
SHLWKLLDRHANTIRLFVLLPEQSPGSYSKRTAYQKAGGDSGNVDDDCERVKGPVGSLKS
VEAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERDSSASVDNRELEQ
HIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADNAQIPLANGLDSH
SITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKAEPYAADEGSGEG
HKWMMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYASNQEFESVRLNETLSSFSDDN
KITIRLGRALKKGEYRVKVYQLLVNEQEPCKFLLDAVFAKGMTVRQSKEELIPQLREQCG
LELSIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEKMKSMSQLAVL
SRRWKPSEMKLDPFQEVVLESSSVDELREKLSEISGIPLEDIEFAKGRGTFPCDISVLDI
HQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKTEELMELTDEQRNELMKKESSRLQKTGH
RVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccggcgaggagaaccaactggtcccgaaagaggctccactggatcataccagt
gacaagtctcttctcgatgctaattttgagccaggaaagaagaactttctgcatttgaca
gataaagatggagaacaacctcaaatgctgctggaggattccagtgctggggaagacagt
gttcatgacagatttataggtccacttccaagagaaggttctgtgggttctaccagtgat
tatgtcagccaaagctactcctactcatctattttaaataagtcagaaacgggatatgtg
ggactagtaaaccaagcaatgacttgctatttgaatagtctattgcaaacactttttatg
actcctgaatttaggaatgcattatataagtgggaatttgaagaatctgaagaagatcca
gtgacaagtattccataccaacttcaaaggctttttgttttgttacaaaccagcaaaaag
agagcaattgaaaccacagatgttacaaggagctttggatgggatagtagtgaggcttgg
cagcaacatgatgtacaagaactatgcagagtcatgtttgatgctttggaacagaaatgg
aagcaaacagaacaggctgatcttatcaatgaactatatcaaggcaagctgaaggactac
gtgagatgtctggaatgtggttatgagggctggcgaatcgacacatatcttgatattccg
ttggtcatccgaccttatgggtccagccaagcatttgctagtgtggaagaagcattgcat
gcatttattcagccagagattctggatggcccaaatcaatacttctgtgaacgttgtaag
aagaagtgtgatgcacggaagggccttcggtttttgcatttcccttatctgctgacctta
caactgaaaagatttgattttgattatacaaccatgcataggattaaactgaatgatcga
atgacatttcctgaggaactagatatgagtacatttattgatgttgaagatgagaaatct
cctcagactgaaagttgcactgacagtggagcagaaaatgaaggtagttgtcacagtgat
cagatgagcaatgatttctccaatgatgatggtgttgatgaaggaatctgccttgaaacc
aatagtggaactgaaaaaatctcaaaatctggacttgaaaagaactccttgatctatgaa
cttttctctgttatggttcattccgggagtgctgctggtggtcattattatgcatgtata
aagtcattcagtgatgagcagtggtacagcttcaatgatcaacatgtcagcaggataaca
caagaggacattaagaaaacacatggtggatcttcaggaagcagaggatattattccagt
gcttttgcaagttccacaaatgcatatatgctgatctatagactgaaggatccagccaga
aatgcaaaatttctagaagtggatgaatacccagaacatattaaaaacttggtgcagaaa
gagagagagttggaagaacaagaaaagagacaacgagaaattgagcgtaatacatgcaag
ataaaattattctgtttgcatcctgcaaaacaagtaatgatggaaaataaattggaggtt
cataaggataagacattaaaggaagcagtagaaatggcttataagatgatggatttagaa
gaggtaatacccctggattgctgtcgccttgttaaatacgatgagtttcatgattatcta
gaacgatcatatgaaggagaagaagatacaccaatgggacttctactaggtggtgtcaag
tcaacatatatgtttgatctgctgttggagacaagaaagcctgatcaggttttccagtct
tacaaacctggagaagtgatggtgaaagttcacgttgttgatttaaaagcagaatctgta
gctgctccaataactgttcgtgcttacttaaatcagacggttacagagttcaaacaactg
atttcaaaggccatccatttacctgctgaaacaatgagaattgtgctggaacgctgctat
aatgatttgcgtcttctcagtgtccccagtaaaaccctgaaagccgaaggattttttaga
agtaacaaggtgtttgttgaaagttccgagactttggattaccagatggcctttgcagac
tctcacttatggaaactcttggatcggcatgcaaatacaatcagattatttgttttgcta
cctgaacaatccccaggatcttattccaaaaggacagcataccagaaagctggaggcgat
tctggtaatgtggatgatgattgtgaaagagtcaaaggacctgtaggaagcctaaagtct
gtggaagctattctagaagaaagcactgaaaaactcaaaagcttatcactgcagcaacag
caggatggagataatggggacagcagtaaaagtactgagacaagtgactttgaaaacatc
gaatcacctctcaatgagagggactcttcagcatcagtggataacagagaacttgaacag
catattcagacttctgatccagaaaattttcagtctgaggaacgatcagactcagatgtg
aataatgacaggagtacaagttcagtggacagtgatattcttagctccagtcatagcagt
gacactttgtgcaatgcagacaatgctcaaatccctttggctaatggacttgactctcac
agtattacaagtagtagaagaactaaagcaaatgaagggaaaaaagagacatgggatacg
gcagaagaagactctggaactgatagtgaatatgatgagagtggcaagagtaggggagaa
atgcagtacatgtatttcaaagcagaaccctatgctgcagatgaaggttctggggaagga
cataaatggatgatggtgcatgttgataaaagaattactctggcagctttcaaacaacac
ctagagccctttgttggagttttatcctctcacttcaaggtctttcgagtgtatgccagc
aatcaagagtttgagagcgtccggctgaatgagacactttcatcattttctgatgacaat
aagattacaattcgactggggagagcacttaaaaaaggagaatacagagttaaagtgtac
cagcttttggtcaatgaacaagagccatgcaagtttctactagatgctgtgtttgctaaa
ggaatgactgtccggcaatcaaaagaagaattaattcctcagctcagggagcaatgtggt
ttagagctcagtattgacaggtttcgtctaaggaaaaaaacatggaagaatcctggcact
gtctttttggattatcatatttatgaagaagatattaatatttccagcaactgggaggtt
ttccttgaagttcttgatggggtagagaagatgaagtccatgtcacagcttgcagttttg
tcaagacggtggaagccttcagagatgaagttggatcccttccaggaggttgtattggaa
agcagtagtgttgatgaattgcgagagaagcttagcgaaatcagtgggattcctttggaa
gatattgaatttgctaagggtagaggaacatttccctgtgatatttctgtccttgatatt
catcaagatttagactggaatcccaaagtttctaccctgaatgtctggcctctttatatc
tgtgacgatggtgcagtcatattttatagggataaaactgaagaattaatggaattgaca
gatgagcaaagaaatgaactgatgaaaaaagaaagcagtcgactccagaagactggacat
cgtgtaacatactcaccccgtaaagagaaagcactaaaaatatatctggatggagcacca
aataaagatctgactcaagactga
DBGET
integrated database retrieval system
