Callithrix jacchus (white-tufted-ear marmoset): 100394403
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Entry
100394403 CDS
T03264
Symbol
SMO
Name
(RefSeq) smoothened homolog isoform X1
KO
K06226
smoothened
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc04340
Hedgehog signaling pathway
cjc04360
Axon guidance
cjc05200
Pathways in cancer
cjc05205
Proteoglycans in cancer
cjc05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100394403 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100394403 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100394403 (SMO)
05205 Proteoglycans in cancer
100394403 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
100394403 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cjc04030
]
100394403 (SMO)
G protein-coupled receptors [BR:
cjc04030
]
Frizzled / Smoothened family
100394403 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
7tm_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
100394403
NCBI-ProteinID:
XP_035110665
Ensembl:
ENSCJAG00000010304
LinkDB
All DBs
Position
8:complement(115258752..115283856)
Genome browser
AA seq
787 aa
AA seq
DB search
MATARPARGPELPLLGLLLLLLLGGPGRGAASSGNATGPEPRSAGGSARRSAAVTGPPPP
LSHCGRAASCEPLRYNVCLGSVLPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWA
VIQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDRFPEGCTN
EVQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAV
TGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCRADGT
MRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYF
HLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLI
RGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEW
ERSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKA
TLLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRHELLQNPGQELSFSMHTVSHDGPV
AGLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDISVTPVATPVPPEEQANLWLVEAE
ISPELQKRLGQKKKRRKRKKEVCPLAPPPELHPPAPAPSTVPRLPQLPRQKCLVAAGAWG
AGDSCRQGAWTLVSNPFCPEPSPPQGPFLPSAPAPMAWAHGRRQGLGPIHSRTNLMEAEL
MDADSDF
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcccgccccgcgcgggggccggagctcccgctcctggggctgctgctgctg
ctgctgctggggggcccgggtcggggggcggcctcgagtgggaacgcgaccgggcctgag
ccgcggagcgcgggcgggagcgcgaggaggagcgcggcggtgaccggccctccgccgccg
ctgagccactgcggccgggcagcctcctgcgagccgctgcgctacaacgtgtgtttgggc
tcagtgctgccctacggggccacctccacgctgctggccggagactcggactctcaggag
gaagcgcacggcaagcttgtgctctggtcgggcctccggaatgccccccgctgctgggca
gtgatccagcccctgctgtgtgccgtatatatgcccaagtgtgagaatgaccgtgtggag
ctgcccagccgtaccctctgccaggccacccgaggcccctgtgccatcgtagagcgggag
cggggctggcctgacttcctgcgctgcactcctgaccgcttccctgaaggctgcacgaat
gaggtgcagaacatcaaattcaacagttcaggccagtgcgaagctcccttggttcggaca
gacaaccccaaaagctggtacgaggacgtggagggctgcggcatccagtgccagaacccg
ctcttcaccgaggccgagcaccaggacatgcacagctacatcgcggccttcggggccgtc
acaggcctctgcacactcttcaccctggccacatttgtggctgactggcggaactcgaat
cgctaccctgctgttatcctcttctacgtcaatgcctgcttctttgtgggcagcattggc
tggctggcccagttcatggatggtgcccgccgggagattgtctgccgtgcggatggcacc
atgaggcttggggagcccacctccaacgagactctgtcctgcgtcatcatctttgttatc
gtgtactacgccctgatggctggcgtggtttggtttgtggtcctcacctatgcgtggcac
acctccttcaaagccctgggcaccacctatcagcctctctcgggcaaaacctcctacttc
cacctgctcacctggtcactcccctttgtcctcactgtggcaatccttgctgtggcccag
gtggatggggactctgtgagcggcatctgttttgtgggctacaagaactaccgataccgt
gcgggcttcgtgctggcaccaatcggcctggtgctcatcgtgggaggctacttcctcatc
cgaggagtcatgactctgttctccatcaagagcaaccaccccgggctgcttagtgagaag
gccgccagcaagatcaacgagaccatgctgcgcctggggatttttggcttcctggccttt
ggttttgtgctcattaccttcagctgccacttctacgacttcttcaaccaggctgagtgg
gagcgcagcttccgggactatgtactgtgccaggccaatgtgaccatcgggctgcccacc
aagaagcccatccctgattgtgaaatcaagaatcgcccgagccttctggtggagaagatc
aacctgtttgccatgtttggaactggcatcgccatgagcacctgggtctggactaaggcc
acgctgctcatctggaggcgaacctggtgcaggttgactggtcagagtgacgatgagccc
aagcggatcaagaagagcaagatgattgccaaggccttctccaagcggcatgagctgctg
cagaacccgggccaggagctgtccttcagcatgcacaccgtgtcccacgacgggcccgtg
gcgggcttggcctttgacctcaatgagccctcagctgatgtctcctctgcctgggcccag
catgtcaccaagatggtggctcggagaggagccatactgccccaggacatttctgtcacc
cctgtggcaactccagtgcccccagaagaacaagccaacctgtggctggttgaggcagag
atctccccagagctgcagaagcgcctgggccagaagaagaagaggaggaagaggaagaag
gaggtgtgcccactggcaccacctcctgagcttcacccccctgcccctgcccccagtacc
gttcctcgactgcctcagctgccccggcagaaatgcctggtggctgcaggtgcctgggga
gctggggactcttgccgacagggagcctggaccctggtctccaacccattctgcccagag
cccagtccccctcagggtccgtttctgcccagtgcaccggcccccatggcctgggctcat
ggccgccgacagggtctggggcccattcactctcgcaccaacctgatggaggcagagctc
atggatgcagactcggacttctga
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integrated database retrieval system
