Callithrix jacchus (white-tufted-ear marmoset): 100395914
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Entry
100395914 CDS
T03264
Symbol
NLRC5
Name
(RefSeq) protein NLRC5 isoform X1
KO
K22615
NLR family CARD domain containing 5
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cjc04054
]
100395914 (NLRC5)
Pattern recognition receptors [BR:
cjc04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
100395914 (NLRC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atypical_Card
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
AAA_16
nSTAND3
AAA
NOD2_WH
AAA_22
NB-ARC
AAA_33
AAA_25
Motif
Other DBs
NCBI-GeneID:
100395914
NCBI-ProteinID:
XP_035137520
LinkDB
All DBs
Position
20:11523116..11616163
Genome browser
AA seq
1883 aa
AA seq
DB search
MDPIGLQLGTRNLWSWLVRLLSKDPEWLNSKMKFFLPNTDLDSRNETSDPEQRIILQLRK
LHVQGLATWQSFIHCVCMELEVPLDLEVPLLSTWGCDDGLTSQLGAEEKSQRESQLHRGL
KRPHQSCGSSPCRKQYRKQQLELAKKYLQLLRTSALQRYGSRIPGSGQPHAFHQAYVPPI
LRRATAPLDTRGGAIMGNPRVEDGTDVSISDLFNTRTNKGPRVTILLGKAGMGKTTLAHR
LCQKWAEGQLDCFQALFLFEFRQLNLITRFLTLPQLLFDLYLSPESDPDAVFQYLEDNAD
QVLLIFDGLDEALQPCSSTDPEDPDGPGPVLALFSGLCHGTLLPGCWVLATSRPGKLPAC
LPSEAAVVHMLGFDGPRVEEYVNCFFSTQSSREGALGELQTNGRLRSLCAVPALCQVACL
CLHHLLPDHAPGQSAALLPTMTQLYMQMVLALSPRGHLPTTSLLGLGEVALKSLETGKVT
FYARDIPPPLMAFGATHSLLTSFCICTGPGHQQTGYAFTHFNLQEFLAALHLMASPKVDE
DLLTQHVTLNSRWVLRTGPKAKLDLSDHLPTFLAGLASCTCRPFLSHMAQRGEDWVGTKQ
AAVVQALKKLATRKLTGPKVVELLHCVNETQEPELASLTAQSLPYQLPFHNFSLTYTDLA
VLTNILEHREAPIHLDFEGCTLEPHCPEALVGCEQIENLSFKSRKCGDAFAEVLSRSLPT
MGRLQMLGLAGSKITARGISHLVKALPLCPQLEEVSFQDNQLNDQVVLNIVEVLPHLPRL
RKLDLSGNNICVSTLLCLTKVAVTCPTISMLQAREADLIFLLSPPKETTAELQRAPDLQE
SDGQRKEAQSRSLTLRLQKCQLQVHDAETLIALLREGPHLEEVDLSGNQLEDEGCRLMAE
AVSQLHITRKLDLSDNGLSVAGVHCVLRAVHACWTLTDLHISLLHKTVVFMFAQDPEQQE
GSQNRAAFLDSLMLQMPSELPLSSRRMRLTHCGLQAKHLEQLCKALGGSCHLGHLHLDFS
GNALGDEGAARLAQLLPGLGALQSLNDLHCATPVISSLSENGLSLDAVLGLARCFSTLQW
VFHLDISFERQRILLRGEKTGRGIWTTGSLPDLPAAAELSGFRWRCTPRSLCLTECPLEP
LTLTRLCATLEVCPGPLEIQLSCEVLSDKSLETLLHCLPQLPQLSLLQLSQTALSPRSPF
LLADIFSLCPRVKKVDLRSLHHSTLHFRSNEEQEGVCCGFTGCSLSQEHVESLCWLLSKC
EDLSQVDLSVNLLGDGGIRSVLECLPRVPISGSLDLSHNNASQESALCLVETLSSCPRVQ
EASVNLGSKQSFQIHFSKEDQAGKTLRLSECSFRPEHVSRLAAGLSQSLQLMELMLTQCC
LGQEQLTTLLSLVQRPAGLFSLRVQEPWVDQAGVLSLLEVCAQASGNVTEISISETQQQL
HVQLEFPRQEENPEAVALRLAHCDLGTHHSLLVRQLMETCARLQQLSLSQVNLCEDGDSS
SLLLRSLLLSLSELKKFRLTSSRVSTEGLAHLASGLGHCHHLEELEWSNTEFDEEGTKAL
MRALEEKWMLKRLDLSHLLLNGSTLDLLTRGLSHMTLLQSLRLNRNSIGDVDCCHLSEAL
RAATSLEELDLSYNQIGDAGVGYLATILPRLPELRKIDLSANSISPAGGVKLAESLALCR
CLEELMLGCNDLGDHTALELAQELPQHLRVLRLPSSHLGPKGALSLVQALDGSPHVEEIS
LAENNLAEGVPRFCKGLPLLRRIDLVSCKIDNQTAKLLTSSFTLCPALEVILLSWNLLGD
EAAAELAQVLPRMGRLKRVDLEKNQITARGAWLLAEGLAQSSVQVIRLWNNNIPCNVAQS
LQSQEPRLDFAFFDNQPQAHWGT
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggaccccattggcctccagctgggcaccaggaacctgtggagctggctggtgaggctg
ctcagcaaagacccagaatggctgaactccaagatgaagttcttcctccccaacacagac
ctggattccaggaatgagacctcagatcctgaacagagaatcatcctacaactcagaaaa
ctgcatgtccaaggtctggccacctggcagtctttcatccactgtgtgtgcatggagctg
gaggtgcctctggacctggaggtgccactgctgagtacttggggctgtgatgacgggctc
accagccagctgggagctgaagagaaaagccaacgtgaatctcagctccatcgtggcctc
aagcgcccccatcagagctgtgggtcctcaccctgccggaagcagtacaggaagcagcag
ctagagttggccaagaagtacctgcagctcctgcggacctctgccctgcagcgctatggg
agccgaatccctgggtcagggcagccccacgccttccaccaggcctatgtccctccaatc
ctgcgccgggccacagcgcccttagacactcggggaggggccattatggggaaccccagg
gtggaagatggcactgatgtgagcatctcagacctcttcaacaccaggactaacaagggc
ccgagggtgaccatactcttggggaaggctggcatgggtaagaccacgctggcccaccgc
ctctgccagaagtgggcagagggccaactggactgtttccaggccctgttcctttttgaa
ttccgccagctcaatctgatcacaaggttcctgacgctgccccagctcctttttgatctg
tacctgagccctgagtcagaccccgatgctgtcttccagtacctggaggataatgctgac
caagtcctgctgatttttgatgggctagatgaggcccttcagccctgctccagcacggat
cctgaggatcctgatggcccaggccctgttcttgccctcttctccggtctctgccatggg
acccttctgccaggctgctgggtgttggccacctcccgtccagggaagctgcctgcctgc
ctgccctcagaggcagctgtggtccacatgttgggctttgatgggcctcgggtggaggaa
tatgtaaattgcttcttcagcacccagtcatcacgggagggggcactgggggagttacag
acaaatggacgtcttcggagcctatgtgcggtgcctgcactgtgccaagtcgcctgcctc
tgcctccaccatctgctccctgaccatgccccaggacagtctgcagccctcctgcccacc
atgactcagctctatatgcagatggtgctcgccctcagtccccgagggcacttgcccacc
acatccctgctgggcctgggggaagtggccctgaagagcctggagacagggaaggttacc
ttctatgcaagagacatccctccacccctgatggcctttggggccacccacagtctgctg
acctccttctgcatctgcacaggccctgggcaccagcagacaggctacgctttcacccac
ttcaacctgcaggagtttttagctgccctgcacctgatggccagccccaaggtggacgaa
gacttactcacccagcatgttaccctcaattcccgctgggtactgaggactggacctaaa
gctaaactggacctctcagaccacctccctaccttcctggcgggcctggcatcctgcacc
tgccgtcccttccttagccacatggcacagcgtggtgaggactgggtgggcaccaagcag
gctgctgtcgtgcaggcattgaagaagttggccacccgcaagctcacagggccaaaggtg
gtagagctgttacactgtgtcaatgagacacaggagcctgagctggccagtctcactgca
caaagcctgccctatcaactgcccttccacaatttctcactgacctacactgacctggct
gtcctgaccaatatcctagagcacagggaggcgcccatccacctggattttgagggctgc
accctggagccccactgccctgaggctctggtaggctgtgagcagatagagaatctcagc
tttaagagcagaaaatgtggagatgcctttgcagaagtcctctccaggagcttgccgaca
atggggaggctgcagatgctggggttagcagggagtaagatcactgcccgaggcatcagc
cacctggtgaaagctttgcccctctgtccacagctagaagaagttagttttcaggacaac
cagctcaatgatcaggtggtgctgaacattgtggaggttctccctcacctaccacggctc
cggaagcttgacctgagcggcaacaacatctgtgtgtcaaccctactttgcttgacaaag
gtggcagtcacgtgtcctaccatcagcatgctgcaggccagggaggcagacctcatcttc
cttctttccccacccaaggagacaactgcagaactacaaagagctccagacctgcaggaa
agtgatggccagaggaaagaggctcagagcagaagtctgacactcaggctgcagaagtgt
cagctccaggtccacgatgcagagaccctcatagccctgctccgggaaggcccccacctg
gaggaagtggacctctcagggaaccagctggaagacgaaggctgtcggctgatggcagag
gcagtatcccaactgcacatcaccaggaagctggacctcagtgacaacgggctctctgtg
gccggggtgcattgtgtgctgagggccgtgcatgcgtgctggaccctgacagacctgcac
atcagcctgctgcacaaaactgttgtcttcatgtttgcccaggacccagagcagcaggag
gggtcccagaacagggctgcatttcttgacagcctcatgctccagatgccctctgagctg
cctctgagctcccgaaggatgaggctgacacattgtggcctccaagcgaagcacctggag
cagctctgcaaggctctgggaggaagctgccaccttggtcacctccaccttgacttctca
ggcaatgctctaggggatgaaggtgcagcccggctggctcagctgctcccagggctggga
gctctgcagtccttgaatgacctccattgtgccactcctgtgatctccagcctcagtgag
aacggtttgtcactggatgctgtgttgggtttggctcggtgcttctccactcttcagtgg
gtcttccacttggacatcagctttgagagacagcgcatcctcctgagaggggaaaaaaca
ggcaggggtatatggaccactggatctttgccagaccttccagctgcagctgagttatcg
gggttccgttggcgctgcacccccaggagcctctgcctcactgagtgtcctctggagccc
ctgaccctcacccgcctctgtgccactctggaggtgtgcccaggaccactggaaatccaa
ttgtcctgtgaggtcctgagtgacaagagtctggagactctgctgcactgcctgccccaa
ctcccccagctgagcctgctgcagctgagccagacagcactgtccccaagaagccccttc
ttactggccgacatcttcagcctgtgcccgagggttaaaaaggtggatctcaggtctctg
caccactcaactctacacttcagatctaacgaggagcaggaaggcgtgtgctgtgggttc
acgggctgcagcctcagccaggaacacgtggagtcactgtgctggttgctgagcaagtgt
gaggacctcagccaggtggacctctcagtaaacctgctgggtgatggtgggatcagatcc
gttctggaatgtctgccgcgggtgcctatctccggttcacttgatctgagtcacaacaac
gcctctcaggaaagtgccctgtgcctggtagagaccctgtcctcctgcccacgtgtccag
gaggcctcggtgaacctgggctctaagcagagcttccagattcacttctccaaagaggac
caggctgggaagacgctcaggctgagtgagtgcagcttccgtccagagcacgtgtctagg
ctggctgccggcctgagccagtccttgcaactaatggagctcatgctgacccagtgctgc
ctgggccaggaacagctgaccaccctcctgagcttggtgcagcgaccagcagggctgttc
agcctcagggtgcaggagccatgggtggaccaagctggggttctctccctgttggaagtc
tgcgcccaggcctcaggcaatgtcactgaaataagcatctccgagacccagcagcagctc
catgtccagctggaatttcctcgccaggaagagaatccagaagctgtggccctcaggttg
gctcactgtgaccttgggacccaccacagccttcttgtgaggcagctgatggagacatgt
gccaggctgcagcagctcagcttgtctcaggttaacctctgtgaggacggtgactccagc
tccctgctgctgcggagtctcctgctgtccctctctgagctgaagaaatttcggctgacc
tccagccgtgtgagcaccgagggccttgcccacctggcatctggtctgggccactgccac
cacttggaggagctggagtggtctaacactgaatttgatgaggagggcaccaaggcactg
atgagggcccttgaagaaaaatggatgctaaagaggctggacctcagtcaccttctgctg
aatggctccaccttggacttgcttactcgaggactaagccacatgaccctcctgcagagc
ctccgactgaacaggaacagtattggtgatgtcgattgctgccacctttctgaggctctc
agagctgccaccagcctggaggagctggacttgagctacaaccagattggagacgctggt
gtcgggtacttagctaccatcctgcccaggctgccagagctcaggaagatagacctctca
gcgaatagcatcagcccagctgggggagtgaagctggcggagtctctcgctctttgcagg
tgcctggaggagctgatgcttggctgcaatgacctgggggatcacacagccctggagctg
gctcaggagctgccccagcacctgagggtcctgcggctgccgtccagccatctgggccca
aaaggggccctaagcctggtccaggccctggatggatccccccatgtggaagagatcagc
ttggcagaaaacaacctggctgaaggggtcccgcgtttctgtaaggggctcccactgctc
agacggatagacctggtttcctgtaagattgacaaccagaccgccaagctcctcacctcc
agcttcacactctgccctgccctggaagtaatcttgctgtcctggaatctcctaggggat
gaggcagctgccgagctagcccaggttctgccgaggatgggccggctgaagagagtggac
ctggagaagaatcagatcacagcccgcggagcctggcttctggctgaagggctggcccag
tctagtgtccaagtcatccgcctctggaataacaacattccctgcaacgtggcccagagc
ctgcagagccaggagcctaggctggacttcgccttctttgacaaccagccccaggcccac
tggggtacctga
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