Callithrix jacchus (white-tufted-ear marmoset): 100397303
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Entry
100397303 CDS
T03264
Symbol
FANCM
Name
(RefSeq) LOW QUALITY PROTEIN: Fanconi anemia group M protein
KO
K10896
fanconi anemia group M protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
100397303 (FANCM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100397303 (FANCM)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
100397303 (FANCM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
HHH_2
Motif
Other DBs
NCBI-GeneID:
100397303
NCBI-ProteinID:
XP_035116309
Ensembl:
ENSCJAG00000015945
LinkDB
All DBs
Position
10:75561030..75638025
Genome browser
AA seq
2043 aa
AA seq
DB search
MSGGQRTLFQTWGSSISRSSGAPGCSSGTERPQSPGSSKAPLPAAAEAEPESDDDVLLVA
VYEAEQQLSLENGGFCTSSGALWIYPTNCPVRDYQLHISRAALFCNTLVCLPTGLGKTFI
AAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYQVMGIPQSHMAEMTGSTQAFTRKEI
WCSKRVLFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAYCQVVRELVKFTNHFR
ILALSATPGSDIKAVQQVITNLLIGQIELRSEDSPDILAYSHERKVEKLIVPLGEELAAI
QKTYIQILEAFAHSLIQRNVLMRKDISNLTKYQIILARDQFRKNPSPNIVGIQQGIIEGE
FAICISLYHGYELLQQMGMRSLYFFLCGIMDGTKGMTRSKNELSRNEDFMKLYKHLECMF
AHTRSTSANGISAIQQGDKKFVYGHPKLKKLEEVVIEHFKSWNAENTSGKKRDKTRVMIF
SSFRDSVQEIAEMLSQHQPIIRVMTFVGHASGKSTKGFTQKEQLEVVKQFRDGGYNTLVS
TCVGEEGLDIGEVDLIICFDSQKSPIRLVQRMGRTGRKRQGRIVVILSEGREERIYNQSQ
SNKRNIYKAISSNRQILHFYQGSPRMVPDGINPKLHKMFITRGVYEPEKPSRNLKRKSSV
FSFKDGTRQSNLKKDWFLSEEEFKLWNKLYRLRDSDEIKEITLPQVQFSSLQNEENRRTH
EPTPGIHQLSLSEWRVWQDHPLPTYQVDHSDRCRHFIGLVQMIEGMRHEEGDCSYELEIE
SYLQMEDVNSTFIAPRNESNNLANDTFITHKKSSFIRKIHQDSSSSVIESDEYADILKQT
HIKPTKIVSLKKKVSKEIKDQLKKENNHSIIDSLDTDRNSIVENIFQVDLPNDERTSDTD
EVAATCTINENLIKEPCVLLTECQFKNKSNSFAGNVLDSGYNSFSDEKSVSSNLFLPFEE
ELYIVRTDDQFSNCHSLTKEVLANVESFLSHSPPPLSGLSDLEYEFAKSSALENLLFLPY
AEHLQSDKCTCLMSHSAVNSQQNLELNSLKCINYPSEKKCFSDIPNDNISDVTSFCDHDV
HKHNQNENLVPNNRVQIHRVPTQNLVGENNHDDDNSDLPVLSTDQDESLLLFEDVNTDFN
DVSLSPLNSKSKSLHESDKIAINEKPLVSQFLISDELLLDNNSEPQDQIICDANNFESHN
DLRGIQKETVKNNEDIFDCSRDLFSVTFDLGFCSPDSDDGILEHASDSSRPLDHLSGRNL
EIKEISDANSVSNPPLIPTDYSKNFTSGTVVSSNEDIQNPKCVNFPLSTAKNEELLSPGY
SQFSLPVGEKVMSTPLSKSNTLNSFYNRRKEILKTPDSNKEKVNLQRFKEALNSTFDYSE
FSLEKSNSSGQIYLHKSCHSVEDGQLLTSNESEDDEIFQRKVKKAKGNVLNSPEDQKNSE
VDSPLHAVKKRRFSINRSELSSSDESENFYNPYSQLEDFKVCNRNARRGIKVRKRQSHLK
HVARKFLDDEAELSEEDAECVSSDENDESENEQDSSLLDFLNDETQLSQAINDSEMRAVY
MKSLRSPMMNNKYKMVHKTHKNINIFSQIPEQDETYLEDSFCVNEEESCKSQSSEEEVCV
DFNLIADDSFANRSKRYKTRRAVMLKQMMEQNCARXKKKLSRIILRDDSSEEENNVNDKR
KSDIAVHPSTVKNKQQDPCFNSVPSGPSPQSKEHSTPIVHQSPKHRKQPSLNLKDTISEV
SDFKPQNHNKGQSTTPPFTTVDSQKECRKFPVPQKDGNALEDSNTSGAFCSNSRRHLAGT
HTSLRLLQEGKGTCILVGGHEITSGLEVISSLRAIHGLQVEVCPLNGCDYIVSNRMVVER
RSQSEMLNSVNKNKLLEQIRHLQSMFERICVIVEKDREKTGDISRMFRRTKSYDSLLTTL
IGAGIRILFSSCQEETADLLKELSLVEQRKNVGIHFPTVMNSSKSEALQFYLSIPNISYI
TALNMCHQFSSVKKMANSSPQEISICAQVTHQKAEEIYRYIHYVFDIQMLPNDINQDRLK
SDA
NT seq
6132 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaggacaaagaacgctttttcagacttggggctcaagcatctcccgatcatct
ggggctccgggttgcagctccggaactgagcgacctcagagccctggcagctccaaggcg
cctttgccagcagcagcggaggctgagccggagtcggacgatgatgtgttgcttgttgcg
gtgtacgaggctgagcagcagctaagtctagagaatggcgggttctgcacttcctcgggc
gccctgtggatttaccctaccaattgtccagtgcgggactaccagctgcacatctcccgg
gctgctctgttctgcaacacgctggtgtgtctgcccaccggactgggaaagacctttatc
gccgccgtggtcatgtataatttttaccgctggttcccttcaggaaaggtggtcttcatg
gccccaacgaaacccttggtgacacagcagatcgaggcttgctaccaggtgatgggtatc
ccgcaatcccacatggccgaaatgacagggtctacacaagctttcaccaggaaggaaata
tggtgcagtaagagagtcctttttcttacacctcaggtcatggtaaatgacctttctaga
ggagcttgtcccgctgctgaaataaaatgtctagttattgatgaagctcataaagctctt
ggaaactatgcttattgccaggttgtaagagaactagtcaaatttacaaaccactttaga
atcttggctctaagtgccacaccaggtagtgatataaaggctgtgcaacaagttattact
aacctgctaattgggcagatagagcttcgttctgaagattctccagatatattggcatat
tctcatgaacgaaaagttgaaaagcttattgttccccttggtgaagaacttgcagccatc
caaaagacctatatccagattttggaagcatttgctcattctttgattcagaggaatgtt
ttgatgagaaaggatatctcaaatctcacaaaataccagataattctggcaagagatcaa
tttaggaaaaacccatctccgaatattgtgggaatacaacaaggcataatcgagggagag
tttgctatttgtattagtttatatcatggttatgaattattgcagcaaatgggaatgaga
tcattatatttcttcctttgtggaattatggatggaactaaaggaatgacacggtcaaaa
aatgaacttagccgaaatgaagacttcatgaaactctataaacatctagagtgcatgttt
gcacatacacgtagtacttcagcaaatggtatttctgctatccaacaaggagataaaaaa
tttgtttatggtcatccaaaattaaagaaattagaagaagttgtaattgaacactttaag
tcatggaacgctgaaaacacttctggaaagaaacgtgataagaccagagttatgatcttc
tcttcatttcgagatagtgttcaagaaattgcagaaatgctttcacagcatcagccaatt
attagagtaatgacttttgttggtcatgcctcagggaaaagcacgaagggttttacccag
aaggagcaactggaggtagtgaaacaatttcgtgatggtggttacaacacattggtttct
acctgtgtgggtgaagaaggtttggatataggagaagttgatcttataatatgttttgat
tctcagaagagcccaattcgtcttgtacaacgaatgggtagaactggccgaaaacgtcaa
ggcaggatagttgttatcctttctgaaggacgagaggaacgtatttataatcaaagtcag
tccaacaaaagaaacatatataaagctatttcaagtaacaggcagatccttcatttttac
caaggaagtccacgaatggttcctgatggaatcaacccaaaattacacaaaatgttcatc
acacgtggtgtctatgaaccagagaagccttctcggaacttgaagcgaaagtcatctgtc
ttttcctttaaggatggaacaaggcaaagtaacctaaagaaagattggttcttatcagaa
gaagaatttaaattatggaacaaactctatagattaagagatagtgatgaaattaaagag
ataacattgcctcaagttcagttttcttctttacaaaatgaggaaaacagacgaactcac
gaaccaacacctggaattcatcaactctctctctctgaatggagagtgtggcaggatcat
cctttgcctacgtatcaagttgatcactcagatcgatgccgccattttataggccttgtg
caaatgatagaaggaatgagacacgaagagggagactgcagctatgaattggaaattgaa
tcttatttacaaatggaagatgtcaactcaacatttattgctcccaggaatgaatctaat
aatcttgccaatgacacctttatcactcacaagaaatcatcatttataaggaagatacat
caagacagttcatcctcagtgatagaatctgatgaatatgctgacattttgaaacaaact
cacatcaaacctactaaaattgtttctttaaagaaaaaggtgtctaaagaaatcaaagat
cagcttaaaaaagaaaataatcatagtattatagattctttagatactgacagaaattct
attgttgaaaatatttttcaagtagacctaccaaatgatgaaaggacatcagatacagat
gaagttgctgccacatgtactattaatgaaaaccttattaaagagccatgtgtattatta
acagagtgtcagtttaaaaataaatctaattcatttgctggaaatgttttagattctggt
tataacagtttcagtgatgaaaaatctgtttcatctaacttatttcttccatttgaagaa
gagctgtatattgttagaacagatgatcaattttctaattgtcactcactgacaaaagag
gtactagctaatgtagagagttttttatctcattctcctccgcctcttagtggactctca
gacttagaatatgaatttgctaagagttctgcacttgagaatttgcttttcttaccctat
gcagagcatttacaaagtgataaatgcacctgtttgatgtcacattcagctgtgaattct
cagcagaatttagaattgaattcacttaaatgtattaattatccatctgaaaaaaaatgc
ttttctgatatacctaatgataatatttctgatgtgacaagcttctgtgaccatgatgta
cataaacataatcaaaatgaaaatttagtacctaacaatcgtgtccaaatacacagagtc
cccacacagaatttagttggagagaataatcacgatgatgataacagtgacctcccagta
ttgtccactgaccaagatgaaagtttactattatttgaagatgttaatacagactttaat
gatgtgagtctttcacccttgaacagtaaaagcaaatctttgcatgagtcagataagatt
gctattaatgaaaagcctctggtctctcagttcttaatttctgatgaacttttgttggac
aataattctgaaccccaagatcaaatcatctgtgatgctaataattttgagtctcataat
gatttgagaggtatacagaaagaaacagtgaagaataatgaggatatttttgattgctct
agggatttattttctgttacctttgatttaggattctgtagtccagattccgatgatgga
atattggaacatgcatcagatagcagtagacctctagatcatctatctggaaggaatttg
gaaattaaggagataagtgatgcaaattctgtttcgaatccaccactgataccaacagat
tatagcaaaaattttacaagtggaactgttgtctcatcaaatgaagatatacagaatcca
aaatgtgtaaattttccactaagtacagcaaaaaatgaagaattgttatctcctggttat
tctcagttttctttaccagtgggagaaaaagttatgagtaccccactctctaaatcaaac
acactgaactcattttataatagaagaaaggaaatacttaagacaccagattctaataag
gaaaaagtgaatctacaaagattcaaagaagcattgaattcaacttttgattattcagaa
ttttctctagaaaagtctaacagcagtggtcagatatatctgcataaatcctgtcattct
gttgaagatggacaattattaacaagtaatgaaagcgaagatgatgagattttccaaaga
aaagttaaaaaagcaaaaggaaatgttttaaactctcctgaggatcagaaaaatagtgaa
gttgattctccgcttcatgctgtcaaaaagcgcagattttctataaatagatcagaatta
tcatctagtgatgagagtgagaatttttacaacccatattcacaattagaagacttcaag
gtttgtaacaggaatgccagaagaggcatcaaagtccgaaagagacagagtcacctaaag
catgtagctaggaagtttttagatgatgaagcagaactttctgaagaagatgcagaatgt
gtttcatcagatgaaaatgatgagtctgaaaatgaacaggattcctcattacttgacttt
ttaaatgatgaaactcagctttcacaggctattaatgattctgaaatgagagctgtttac
atgaaatctttgcgtagtccaatgatgaacaataagtacaaaatggttcataagacacat
aaaaacataaacattttctcacagattcctgaacaagatgaaacctatttagaagatagt
ttttgtgttaatgaagaggagtcttgcaaaagccaatcaagtgaagaagaagtttgtgtt
gattttaacttaatagctgatgattcctttgcaaataggagtaaaagatataagactcga
cgtgcagtaatgctaaaacaaatgatggaacaaaattgtgcacgtntcaaaaagaagtta
tccagaattattttacgagatgattcaagtgaggaggagaataatgtaaacgataaaaga
aaatctgatattgcggttcacccaagcactgttaagaacaaacaacaggacccttgtttc
aattcagtgccttctggaccttcaccgcagtccaaggagcattctactccaatagttcat
caatcaccaaagcacagaaaacagccatcacttaatttaaaggatacaatttctgaagtc
tcagacttcaaacctcagaatcataataaagggcagtctaccacaccaccattcactact
gttgattcacagaaagaatgtagaaaatttccagttccacaaaaggatggtaatgctttg
gaggattctaacacttcaggggcattctgttccaattcaagacgacatttagctgggaca
catacttcccttagacttctacaggaaggaaaaggaacctgtattcttgtaggtggtcat
gaaatcacttctggattagaagtaatttcttccctaagagcaattcatggcttacaagta
gaagtttgtcctcttaatggctgtgattacatcgtgagtaaccgcatggtggtggaaagg
aggtctcaatctgagatgttaaatagtgtcaataagaacaagctccttgagcagatccgg
cacctgcagagcatgtttgaaagaatatgtgtgattgtggaaaaggacagagaaaaaaca
ggagacatatcaaggatgtttaggagaacaaagagctatgacagcctgctgactacctta
attggcgctggaatccgaattcttttcagttcctgccaagaagaaactgcagatttgcta
aaggaactgtccttagtggaacaaagaaagaatgttggtattcattttccaacagtaatg
aatagtagtaaaagtgaggcactccagttttatttaagtattcccaatataagttacatt
actgcattaaatatgtgtcaccagttttcatctgtgaaaaagatggctaacagctcacct
caagaaatatccatctgtgcacaagtaactcatcagaaggctgaggagatctacagatac
attcactatgtatttgacatacaaatgttaccaaatgatattaaccaagatagactgaaa
tctgatgcatga
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