Callithrix jacchus (white-tufted-ear marmoset): 100398256
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Entry
100398256 CDS
T03264
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc02010
ABC transporters
cjc04976
Bile secretion
cjc05206
MicroRNAs in cancer
cjc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100398256 (ABCB1)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
100398256 (ABCB1)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
100398256 (ABCB1)
09162 Cancer: specific types
05226 Gastric cancer
100398256 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjc02000
]
100398256 (ABCB1)
04147 Exosome [BR:
cjc04147
]
100398256 (ABCB1)
04090 CD molecules [BR:
cjc04090
]
100398256 (ABCB1)
Enzymes [BR:
cjc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
100398256 (ABCB1)
Transporters [BR:
cjc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
100398256 (ABCB1)
Exosome [BR:
cjc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100398256 (ABCB1)
CD molecules [BR:
cjc04090
]
Proteins
100398256 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
Rad17
Zeta_toxin
AAA
AAA_5
AAA_29
G-alpha
AAA_14
AAA_7
AAA_30
nSTAND1
DUF815
AAA_15
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
100398256
NCBI-ProteinID:
XP_035109819
Ensembl:
ENSCJAG00000014528
LinkDB
All DBs
Position
8:59424223..59539650
Genome browser
AA seq
1279 aa
AA seq
DB search
MDLEGDRNGGAGKNFYKLNHKSEKDKKEKKPTVSVFAMFRYSNWLDKLYMVVGTLSAIIH
GASLPLMMLVFGEMTDTFANAGKLEDLYSNTTNESYIKITGAFENLEEDMTRYAYYYSGI
GAGVLVAAYIQVSFWCLAAGRQIYKIRKQFFHAIMQQEMGWFDVHDVGELNTRLTDDVSK
INEGIGDKIGMFFQSMATFFTGFIVGFTRGWKLTLVILAISPVLGLSAAVWAKILSSFTD
KELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEEAKRIGIKKAITANISIGA
AFLLIYASYALAFWYGTTLVLSEEYTIGQVLTVFFAVLIGAFGIGQTSPSIEAFANARGA
AYEIFKIIDNKPSIDSYSKSGHKPDNIKGNLEFRNVHFSYPSRKEVKILKGLNLKVQSGQ
TVALVGNSGCGKSTTVQLIQRLYDPTEGMVSVDGQDIRTINVRFLREIIGVVSQEPVLFA
TTIAENIRYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAI
ARALVRNPKILLLDEATSALDTESEAVVQVALDKARKGRTTVVIAHRLSTVRNADVIAGF
DDGVIVEKGNHDELMKEKGIYFKLVTMQTAGNEIELENAADESKSEIDALEMSSNDSGSS
LIRKRSSRRSIRGSQGQDKKPSTKENLDESIPPVSFWRILKLNLTEWPYFVVGVFCAIIN
GGLQPAFSVIFSKIIGVFTRNDDPETKRQNSNIFSLLFLVLGIISFITFFLQGFTFGKAG
EILTKRLRYMVFRSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGAIGSRLAVITQNIA
NLGTGIIISFIYGWQLTLFLLAIVPIIAIAGVVEMKMLSGHALKDKKELEGAGKIATEAI
ENFRTVVSLTQEQKFEHMYAQNLQVPYRNSLKKAHIFGITFSFTQAMMYFSYAGCFRFGA
YLVAHRLMSFEDVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSAAHIIMIIEKTPLIDSY
STEGLKPKTLEGNVTFNEVVFNYPSRPDIAVLQGLSLEVKKGQTLALVGSSGCGKSTVVQ
LLERFYDPLAGKVLLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIGENIAYGDNSRVVS
QEEIVRAAKEANIHTFIESLPKKYNTRVGDKGTQLSGGQKQRVAIARALVRQPHILLLDE
ATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEQGTHQQLL
AQKGIYFSMVSVQAGAKRQ
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggatctcgaaggggaccgcaatggaggagcagggaagaacttttataaactgaatcat
aaaagtgaaaaagataagaaggaaaagaaaccaactgtcagtgtttttgcaatgtttcgc
tattcaaattggcttgacaagttgtatatggtggtgggaactttgtctgccatcatccat
ggggcttcacttcccctcatgatgctggtgtttggagaaatgacagacacttttgcaaat
gctggaaagttggaagatctgtactcaaacaccactaatgaaagttatatcaaaattaca
ggggccttcgagaatctggaggaagacatgaccaggtatgcctattattacagtggaatt
ggtgctggagtgctggttgctgcttacattcaggtttcattttggtgcctggcagctgga
agacaaatatacaaaataagaaaacagttttttcatgctataatgcaacaggagatgggc
tggtttgatgtgcatgatgttggagagcttaacactcggcttacagatgatgtctccaag
attaatgaaggaattggtgacaaaattggaatgttctttcagtcaatggcaacgtttttc
actgggtttatagtaggatttacacgtggttggaagctaacccttgtgattttggccatc
agtcctgttcttggactgtcagctgctgtctgggcaaagatattatcttcatttactgat
aaagaactcttagcatatgcaaaagctggagcagtagctgaagaggtcttggcagcaatt
agaactgtgattgcctttggaggacaaaagaaagaacttgaaaggtacaacaaaaattta
gaagaagctaaaagaattgggataaagaaagccattacagccaatatttctataggtgct
gctttcctactgatctatgcatcttatgctctggccttctggtatgggaccacgttggtc
ctctcagaggaatatactattggacaagttctcactgtattctttgccgtattaattggg
gcttttggtattggacagacatctccaagcattgaagcatttgcaaatgcaagaggagca
gcatatgaaatcttcaagataattgataataagccaagcattgacagctattcgaagagt
gggcacaaaccagataatattaagggaaatttggaattcagaaatgttcacttcagttac
ccatctcgaaaagaagttaagatcttgaagggcctgaacctgaaggtgcagagtgggcag
acggtagccctggttggaaacagtggctgtgggaagagcacaacggtccagctgatacag
aggctctatgaccccacagaaggcatggtcagtgttgatggacaggatattaggaccata
aatgtaaggtttctacgggaaatcattggtgtggtgagtcaggaacctgtgttgtttgcc
accacgatcgctgaaaacattcgctatggccgtgaaaatgtcaccatggatgagattgag
aaagctgtcaaggaagccaatgcctatgactttatcatgaaactgcctcataaatttgac
accctggttggagagagaggggcccagctgagtggtgggcagaagcagaggattgccatt
gcacgtgccctggttcgcaaccccaagatcctcctgctggacgaggccacgtcagccttg
gacacggaaagtgaagcagtggttcaggtggctctggataaggccagaaaaggccggacc
accgttgtgatagctcatcgtttgtctacagttcgtaatgctgatgtcatcgctggtttt
gatgatggagtcattgtggagaaaggaaatcatgatgagctcatgaaagagaaaggaatt
tacttcaaacttgtcacaatgcagacagcaggaaatgaaattgaattagaaaatgcagct
gatgaatccaaaagtgaaattgatgccttggaaatgtcttcaaatgattcaggatccagt
ctaataagaaaaagatcaagtcggaggagtatccgtggatcacaaggccaagacaaaaag
cctagtaccaaagagaatctggatgaaagtatacctccagtttccttttggaggattttg
aagctaaatttgactgaatggccttattttgttgttggtgtattttgtgccattataaat
ggaggcctgcaaccagcattttcagtaatattttcaaagattataggggtttttacaaga
aatgatgatcctgaaacaaaacggcagaatagtaacatattttcactattgtttctagtt
cttggaattatttcttttattacatttttccttcagggcttcacatttggcaaagctgga
gagatcctcacaaagcggctccgatacatggttttccgatccatgctcagacaggatgtg
agctggtttgatgaccctaaaaacaccactggagcattgactaccaggctcgccaatgat
gctgctcaagttaaaggggctataggttccaggcttgctgtaattacccagaatatagca
aatcttgggacaggaataattatatccttcatctatggctggcaactaacactatttctc
ttagcaattgtacccatcattgcaatagcaggagtggttgaaatgaaaatgttgtctgga
catgcactgaaagataagaaagaactagaaggtgctgggaagattgctactgaagcaata
gaaaacttccgaactgttgtttctttgacccaggagcagaagtttgaacatatgtatgca
cagaatttgcaggtaccctacagaaactctttgaagaaagcacacatctttggaatcaca
ttttccttcacccaggcaatgatgtatttttcctatgctggctgtttccggtttggagcc
tacttggtggcacataggctcatgagctttgaggatgttttgctagtattttcagctatt
gtctttggtgccatggccgtcgggcaagtcagttcatttgctcctgactatgccaaagcc
aaagtatcagcagctcacatcatcatgatcattgaaaaaacccctttgattgacagctac
agcactgaaggcctaaagccgaaaacactggaaggaaatgtgacatttaatgaagttgta
ttcaactatccctcacgaccggacatcgcagtgcttcaggggctgagcctggaggtgaag
aagggccagacactggccctggtgggcagcagtggctgtgggaagagcacggtggttcag
ctcctggagcggttctacgaccccttggcagggaaagtgctgcttgatggcaaagaaata
aagcaactgaatgttcagtggctccgagcacacctgggcatcgtgtcccaggagcccatc
ctgtttgactgcagcattggtgagaacattgcctatggagacaacagccgagtggtgtca
caagaagagatcgtgagggcagccaaggaggccaacatacacaccttcatcgagtcactg
cctaagaaatataacaccagagtaggagacaaaggaacccagctctctggtggccagaaa
cagcgtgtggccatagctcgtgcccttgttagacagcctcatattttgcttttggatgaa
gccacatcagctctggatacagaaagtgaaaaggttgtccaagaagccctggacaaagcc
agagaaggccgcacctgcattgtgattgctcaccgcctgtccaccatccagaatgcagac
ttgatagtggtgtttcagaatggcagagtcaaggagcaaggcacgcatcagcagctgctg
gcacagaaaggcatctatttttcaatggtcagtgtccaggctggagcaaagcgccagtga
DBGET
integrated database retrieval system
