Callithrix jacchus (white-tufted-ear marmoset): 100406402
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Entry
100406402 CDS
T03264
Symbol
LINGO2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100406402 (LINGO2)
Membrane trafficking [BR:
cjc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
100406402 (LINGO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRRNT
V-set
Ig_C17orf99
LRR_9
Ig_6
Motif
Other DBs
NCBI-GeneID:
100406402
NCBI-ProteinID:
XP_035150250
Ensembl:
ENSCJAG00000022711
LinkDB
All DBs
Position
1:complement(132191282..133468074)
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AA seq
606 aa
AA seq
DB search
MLHTAISCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETK
ILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLV
PLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLE
QLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDM
MPANSLYGLNLTSLSITNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQ
ELHIVGAQLRTIEPHSFQGLHFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACD
CRLLWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHL
LVDEGQTVQLECNADGDPQPVISWVTPRRRFITTKSNGRATVLADGTLEIRFAQDQDSGM
YVCIASNAAGNDTFTASLTVKGFASDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKT
ILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRR
FNMKMI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacacggccatatcatgctggcagccattcctgggtctggctgtggtgttaatc
ttcatgggatccaccattggctgccctgctcgctgtgagtgctctgctcagaacaaatct
gttagctgtcacagaaggcggttgatcgccatcccagagggcattcccattgaaaccaaa
atcttggacctcagtaaaaacaggctaaaaagtgtcaaccctgaagaattcatatcatat
cctctgctggaagaaatagacttgagtgacaacatcattgccaatgtggaacccggagca
ttcaacaatctctttaacctgcgttccctccgcctaaaaggcaatcgtctgaagttagtc
ccgttaggggtattcacggggttgtccaatctcaccaagctcgacattagtgagaataag
attgtcattttactagactacatgttccaggatctacataacctgaagtctctagaagtg
ggggacaatgatttggtttatatatcacacagggcattcagtgggctacttagcttagag
cagctcactctggagaaatgcaacttaacagcagtaccaacagaagccctatcccacctc
cgcagcctcatcagcctgcatctgaaacatctcaatatcaacaatatgcccgtgtatgcc
tttaaaagactgttccacctgaaacacctagagattgactattggcctttactggatatg
atgcctgccaatagcctttacggtctcaacctcacatccctttcaatcaccaacacaaat
ctgtctaccgtacctttcctcgcctttaaacacctggtatacctgactcaccttaacctc
tcctacaatcccatcagcactattgaagcaggcatgttctctgacctgatccgccttcag
gagcttcatatagtgggggcccagctccgcaccattgaacctcactccttccaagggctc
cacttcctacgcgtgctcaacgtgtctcagaacctgctggaaactttggaagagaatgtc
ttctcttcccctagggctctggaggtcctgagcattaacaacaaccctctggcctgtgac
tgccgccttctctggatcttgcagcgacagcccaccctgcagtttggtggccagcaaccc
atgtgtgctggcccagacaccattcgtgagaggtcattcaaggatttccatagcactgcc
ctttctttttactttacctgcaaaaaacccaaaatccgtgaaaagaagttgcagcatctg
ctagtagatgaagggcagacagtccagctagaatgcaatgcggatggagacccacagcct
gtgatttcctgggtgacaccccgaaggcgtttcatcaccaccaagtccaatggaagagcc
actgtattggcagacggcaccttggaaattcgctttgcccaggatcaagacagtgggatg
tatgtttgcatcgctagcaatgctgctgggaatgacaccttcacagcctccttaactgtg
aaaggatttgcttcagatcgctttctttatgcgaacaggacccctatgtacatgaccgac
tccaatgacaccatttccaatggcactaatgccaatacattttccttggaccttaaaaca
atactggtatcaacagctatgggctgcttcactttcctgggagtggttttattttgtttt
cttctcctttttgtgtggagccgagggaaaggcaagcacaaaaacagcattgaccttgag
tatgtgcccagaaaaaacaatggtgctgttgtggaaggggaggtagctggacccaggagg
ttcaacatgaaaatgatttga
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