Callithrix jacchus (white-tufted-ear marmoset): 100408634
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Entry
100408634 CDS
T03264
Symbol
SYNRG
Name
(RefSeq) synergin gamma isoform X15
KO
K25219
synergin gamma
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjc04131
]
100408634 (SYNRG)
Membrane trafficking [BR:
cjc04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
100408634 (SYNRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_4
Motif
Other DBs
NCBI-GeneID:
100408634
NCBI-ProteinID:
XP_002748365
Ensembl:
ENSCJAG00000015209
UniProt:
U3BY33
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All DBs
Position
5:complement(93816805..93914903)
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AA seq
1319 aa
AA seq
DB search
MALRPGAGSGGGGAAGAGAGAAGGGSFMFPVAGGIRPPQAGLMPMQQQGFPMVSVMQPNM
QGIMGMNYSSQISQGPIAMQAGIPMGPMPAAGMPYLGQAPFLGMRPPGPQYTPDMQKQFA
EEQQKRFEQQQKLLEEERKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFS
RDAKMHPTPASHPKKPGPFLEEKLLVSCDISTSGQEQIKLNTSEVGHKALGPGSSKNHPS
LTASNGGAVDGCVSGTTTAEAEKTSDQNLSIEESGVGVFPSQDPVQPRMPPWIYNESLVP
DAYKKILETTMTPTGIDTAKLYPILMSSGLPRETLGQIWALANRTTPGKLTKEELYTVLA
MIAVTQRGVPAMSPDALNQFPAAPIPTLSGFSLTLPTPVSQTTVIPSGPAGSMPLSLGQP
VMGINLVGPVGGAAAQASGGFLPTYPANQVVKPEEDDFQDFQDASKSGSLDDSFSDFQEL
PASSKTSNSQHGNSAPSLLMPLSGTKALPSMDKYAVFKGIAADKSSENTVPPGDPGDKYS
AFRELEQTAENKPLGESFPEFRSAGTDDGFTDFKTADSISPLEPPTKDKTFPPSFPSGTI
QQKQQTQVKNPLNLADLDMFSSVNCSSEKPLSFSAAFSTSKSASTPQPTGSAATTAALAS
TALALTKTSSLADDFGEFSLFGEYSSPASVGEQDDFADFMAFSNSSISSEQKADDKYDAL
KEEASPVSLTSNMGSTVKGGQNPTAASSKYDVFRQLSLEGSGLGVEDLKDNTPSGKSDDD
FADFHSSKLSSINSDKSLGEKAVAFRHTKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQ
FDMKLADVGGDLKHVMSDSSLDLPTVSGQHPPAADIEDLKYAAFGSYSSNFAVSTLTSYD
WSDRDDASQGRKLSPFVLSAGSGSPSATSILQKKETSFGSSENITMTSLSKVTTFASEDA
LPETTFPAFASFKDMIPQTPEQKEYESRDYKDFTRQDLPTAERSQEATCPSPASSGASQE
TPNECSDDFGEFQSEKPKISKFDFLVATSQSKMKSSEEMIKSELATFDLSVQGSHKRSLS
LGDKEISRSSPSPALEQPFRDRSNTLNEKPALPVIRDKYKDLTGEVEENERYAYEWQRCL
GSALDVIKKANDTLNGISSSSVCTEVIQSAQGMEYLLGVVEVYRVTKRVELGIKATAVCS
EKLQQLLKDIDKVWNNLIGFMSLATLTPDENSLDFSSCMLRPGIKNAQELACGVCLLNVD
SRSRKEEKPAEEHPKKAFNSETDSFKLAYGGHQYHASCANFWINCVEPKPPGLILPDLL
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcggccgggagctggttctggcggcggcggggccgcgggagccggcgcaggg
gccgccgggggaggcagcttcatgtttcctgttgcaggtgggataagaccccctcaagca
ggcctgatgccgatgcagcaacaaggatttcctatggtctctgtcatgcagcctaatatg
caaggcattatgggaatgaattacagctctcagatttcccaaggacctattgctatgcag
gcaggaataccaatgggaccaatgccagcagcaggaatgccttacctaggacaagcaccc
ttcctgggcatgcgtcctccaggcccacagtacactccagacatgcagaagcagtttgct
gaagagcagcaaaaacgatttgaacagcaacaaaaactcttagaagaagaaagaaaaagg
cgccagtttgaagagcagaagcaaaagctcagacttttgagcagtgtgaaacccaagaca
ggagagaagagtagagatgatgctttggaagccataaaaggaaatttagatggattttcc
agagatgcaaagatgcaccctactccagcatcgcaccccaaaaaaccaggccctttcttg
gaggagaagctcctcgtatcttgtgatataagtacatctgggcaggaacaaattaaatta
aatacctctgaagttggccacaaagccctaggcccaggttccagtaagaaccatcccagt
ttaacggccagtaacgggggtgctgtagatggatgtgtaagtggcaccactactgcagag
gcagaaaagacttcagatcaaaacctgtcaattgaagagagtggtgtgggagtatttccc
tcacaggatcctgttcagcccagaatgcctccttggatttacaatgagagcttggttcca
gatgcctataagaaaatcttagaaaccacaatgactccaactggaatagatactgcaaaa
ctgtatcccattctgatgtcatctggacttcccagggaaactcttggacagatatgggcc
ttagctaatcgaactacacctggcaaacttacaaaagaagaactttataccgttcttgcc
atgatagcagtaacacagaggggcgttcctgcaatgagtcctgatgctttaaaccagttc
ccagcagctcctattccaactttaagtggtttttctctgactctgcctacgccagtgagt
cagacaactgtgataccgtcaggccctgcgggctccatgcccctcagccttggacagcca
gtcatgggcattaaccttgttggaccagtgggtggagctgcagcccaggcttctggtggt
ttcctgccaacttaccctgcaaatcaggtagtaaagccagaagaagatgacttccaggat
tttcaagatgcttctaagtcaggatcccttgatgactcattcagtgatttccaagagttg
cctgcttcttcaaaaaccagtaactcccagcatggaaatagtgccccttctttgttgatg
ccactttctggaactaaagcattgccttcaatggacaaatatgctgtatttaaaggaatt
gccgctgataagtcttctgaaaatactgttccacctggagatcctggtgataaatatagt
gctttcagagaactcgaacagacggcagagaataaacctttaggagaaagctttccagaa
ttcagatctgcaggaactgatgatggtttcaccgattttaaaacagctgatagtatatca
ccactagagccaccgacaaaagacaaaacttttccaccatccttcccctcaggaactata
caacagaagcagcaaacacaagtgaaaaatcctctgaacttagcagaccttgatatgttt
tcctcagttaattgcagcagcgagaaaccattgtctttttcagctgcgtttagcacatct
aaatcagcttccacaccacagccaacaggttccgctgctactacggcagcattggcatcg
acagcattggcattgacgaagacttctagtttggctgatgattttggagaattcagcctt
tttggggaatattctagtccagcatctgttggggagcaggatgactttgcagattttatg
gctttcagtaatagctctatttcatctgagcaaaaggcagatgacaaatatgatgccctt
aaagaggaagccagtcctgtttctctaaccagcaacatgggcagcacagtgaaaggtggg
cagaatcccactgctgcatcttccaagtatgatgtcttcagacaactttctctggaaggg
tctggactaggtgttgaagacctgaaagataacactccttcaggaaaaagtgatgatgat
tttgctgacttccactccagcaaactttcttctataaactcagacaaatccctgggagag
aaagctgtggctttcagacacaccaaagaagactctgcgtcagtgaagtccttggatctc
ccttccattggtggcagcagtgttggcaaggaggactctgaagatgcactctctgttcag
tttgacatgaaattggctgatgtgggaggagatcttaagcatgtcatgtctgatagctct
ttggatttaccaacagttagtggccagcatcctcctgctgcagatatagaggacttaaaa
tatgctgcttttggaagctacagtagcaattttgcagtgagcacacttacaagctatgac
tggtcagacagggatgatgcatctcagggcagaaaactctctccatttgtcctctcagca
ggaagtggatccccctcagcgacctcaattcttcaaaagaaagagacttcatttggcagt
tctgaaaacatcaccatgacatctctttccaaagtaacgacctttgcaagtgaagatgct
cttccagagacaaccttcccagcttttgccagttttaaagacatgattcctcagacccct
gagcaaaaggaatatgaaagcagagactataaagatttcacaagacaggacctgcctaca
gctgaacgaagccaagaggccacgtgtcccagcccagcttccagtggtgcctctcaagaa
acccccaacgaatgttcagatgactttggagagtttcaaagtgaaaagcccaaaatcagc
aaatttgacttcttagtagccacttcacaaagcaaaatgaaatccagtgaagaaatgatc
aaaagtgagctggcaacctttgacctttctgttcaaggatcacacaagaggagtttgagc
cttggtgataaagaaataagccgttcttctccttctccagctttggagcagcctttcaga
gaccgttccaatactctcaatgagaagcctgcgctgcctgtcatccgagacaagtacaaa
gacctgacaggagaggtggaggaaaatgagagatatgcatatgaatggcagaggtgcctg
gggagtgccctggatgtcattaagaaggcaaatgataccttaaatggaatcagtagtagt
tctgtttgcacagaagtaattcagtcagcacaaggcatggaatatttattaggtgttgtt
gaagtgtacagggtaaccaagcgtgtggagctggggataaaagccactgcagtatgcagt
gagaaactgcagcagttgctgaaggacatcgataaagtatggaacaacctaatcggcttc
atgtcactcgccacactcacaccagatgagaactcgctggatttttcctcctgtatgcta
cggcctgggattaaaaatgctcaggaacttgcctgcggcgtgtgcctcttaaatgtggac
tcaaggagccggaaagaagagaagcctgcagaagaacatcctaaaaaagcattcaactca
gaaacagacagtttcaagctggcctatggagggcaccagtatcacgccagctgtgccaac
ttctggatcaactgtgtcgaaccaaagcctcctggcctcatcctgcctgacctgctctga
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