Callithrix jacchus (white-tufted-ear marmoset): 100411767
Help
Entry
100411767 CDS
T03264
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc03250
Viral life cycle - HIV-1
cjc04623
Cytosolic DNA-sensing pathway
cjc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100411767 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
100411767 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100411767 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjc03400
]
100411767 (SAMHD1)
DNA repair and recombination proteins [BR:
cjc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
100411767 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_2
SAM_1
HD_assoc_2
PDEase_I
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
100411767
NCBI-ProteinID:
XP_008993676
Ensembl:
ENSCJAG00000001230
LinkDB
All DBs
Position
5:221766..295267
Genome browser
AA seq
664 aa
AA seq
DB search
MLPMLPGRPARALLSVRLRAGWAPRFLTLLCRTPSVDMQQADSEQPSKRPRCDDSPRTPP
NTPSAEADRSLGPELHPDHKTWGPEQVCSFLRRGGFKEPGLLKNIRENKITGSLLPCLDE
SHFENLGVSSLWERKRLLSYIQRMSQIHIDTMKVINDPIHGHIELHPLLIRIIDTPQFQR
LRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRALCEKQPELQISERDMLCVQIAG
LCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVKMFEHLINSNGLKAVMEHYGLIPEE
DICFIKEQIAGPLESPIKKDSLWPYKGRPKEKSFLYEIVANKRNGIDVDKWDYFARDCHH
LGIQNNFDYKRFIKFARVCEVESKLHICTRDKEVGNLYDMFHTRNCLHRRAYQHKVGNII
DTMITDAFLKADPYIEITGTEGKKYCISTAIDDMEAYTKLTDNIFLEILYSTDPKLKAAR
EILKSIEYRNLYKYVGETQPTGQIKIKRENYECLPKEVADAKPKVPLEVKLKAEHFIVDV
INMDYGMQDKNPIDHVRFYCKSDPSKAIMITKNQVSQLLPERFAEQLIRVYCKKTDAKSL
YAAQQHFVQWCSDKNFTKPQDGDVVAPLITPQKDEWNYRASAQSPARLREASKSRARLFK
DDPV
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgatgctccctggacgccccgccagggccctgctgtcagtgcgcctgcgcgcg
ggctgggcgccgcggttcttgactttgctgtgccggactccgagtgtagacatgcagcaa
gccgactccgagcagccctccaagcggccccgttgcgatgacagcccgagaaccccccca
aacaccccttccgcagaggcagaccggtccttgggtccggaactccatcctgaccacaag
acgtggggcccggagcaggtgtgctccttcctcaggcgcggtggcttcaaagagccgggg
ctgttgaagaacatccgagaaaataaaatcacaggctcattactgccctgtcttgatgag
tctcattttgaaaatcttggagtaagttccttgtgggagaggaagaggctgcttagttat
atccagcgaatgagtcaaatccacattgatacgatgaaggtaattaatgatcctatccat
ggccacattgagctccaccctctcctcatccgaatcattgatacgcctcaatttcaacgt
cttcgatatatcaaacagctgggaggtggttattatgtttttccaggagcttcacacaat
cgatttgagcatagtctaggggtggggtatttggcaggatgtctagttcgagcactttgt
gaaaaacaaccagagctgcagataagtgaacgagatatgctctgtgttcagattgctggg
ctttgtcatgatcttggtcatgggccattttctcacatgtttgatggacgatttattcca
cttgctcgcccggaggtgaaatggacacatgaacaaggctcagttaagatgtttgagcac
ctaattaattctaatggactcaaggctgtcatggaacactatggtctcatccctgaagaa
gatatttgctttatcaaggaacaaattgcaggaccacttgaatcacctatcaaaaaagat
tctttgtggccatataaagggcgtcctaaagaaaaaagcttcctttatgagatagtggct
aataaaagaaatggcattgatgtggacaagtgggattattttgccagggactgccatcat
cttggaatccaaaataattttgattacaagcgttttattaagtttgcccgtgtctgtgaa
gtagaaagcaagttgcatatttgtactagagataaggaagttggaaatctgtatgacatg
ttccacactcgcaactgtttacaccgtagagcttatcaacacaaagttggcaacatcatt
gatacaatgattacagatgcgttcctcaaagcggacccctacatagagattacaggtact
gaaggaaagaagtattgcatttctacagcaattgatgacatggaagcctacactaagctg
acagataacatttttctggagattttatactctactgatcccaaattgaaggcggcacga
gagattttaaaaagtattgaataccgtaatttatacaagtatgtgggtgagacccagcca
acaggacaaataaagattaaaagggagaactatgaatgtcttccaaaagaggttgctgat
gctaaacccaaagtaccactagaagtaaagctgaaggctgaacattttatagtggatgtt
atcaacatggattatggaatgcaagacaagaatccaattgatcatgttcgattctattgt
aagagtgaccccagcaaagcgataatgattactaaaaaccaggtttcacaacttctgcca
gagagatttgcagagcagctgattcgagtatactgtaagaagacagatgcgaagagtttg
tatgctgcacagcaacactttgttcagtggtgttctgacaaaaatttcaccaagccgcag
gatggcgatgttgtagccccactcataacacctcagaaagacgaatggaactacagggct
tcagcccagagtccagctcgcctccgagaagcatccaaaagcagagcccggctttttaag
gatgacccggtgtaa
DBGET
integrated database retrieval system
