Callithrix jacchus (white-tufted-ear marmoset): 100412124
Help
Entry
100412124 CDS
T03264
Symbol
VSX1
Name
(RefSeq) visual system homeobox 1
KO
K09335
visual system homeobox protein 1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjc03000
]
100412124 (VSX1)
Transcription factors [BR:
cjc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100412124 (VSX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100412124
NCBI-ProteinID:
XP_002747576
Ensembl:
ENSCJAG00000011818
UniProt:
A0A8I3WX80
LinkDB
All DBs
Position
5:complement(29700525..29707604)
Genome browser
AA seq
364 aa
AA seq
DB search
MTGRDALSDGRTRSRALVPGGSPRGSRPRGFAITDLLGLEADLPAPAGPEQGSGCEGPAA
APCPGPGLDSSSLARGGLPLGLGLLCGFGAQPPAAARAPCLLLTDVPFLPPRGPEPVAPQ
APSRPPALGRQKRSESVSTSDEDSPCEDRNDLKASPTLSKRKKRRHRTVFTAHQLEELEK
AFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGAM
VRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAVLWGSDRLKEGS
SQSQAGPQRGSDKVSPENALEDVAMDLSSSARPETKKVHPGAGAQRESNSTALEGSQPGK
AGAV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgactggccgggacgcgctttccgacggccgcaccaggagcagggcgctggtgcctggc
ggttctccccggggctcgcgaccccggggcttcgccatcacggacctgctgggcttggag
gccgacctgccggcgcccgccggcccggaacagggatctggctgcgagggtccggcggcc
gcaccgtgccctggcccagggctcgacagctccagcctggcgcgtgggggcctcccgctg
gggctcggcctcctctgtggcttcggcgcgcagcctcccgcggccgctcgagcgccctgc
ctgctcctaactgacgtgccgttcctgccgcccaggggccccgagcccgttgccccgcag
gcccccagtcggccgcctgcgctcggccgccagaagcgcagcgagagcgtctcgacatcc
gatgaggacagcccatgtgaagacaggaatgacctaaaggcgtcccccaccctgagcaag
aggaagaagcggaggcacaggacagttttcactgctcaccagctggaagagctggagaag
gcgttcagcgaggcccactaccctgatgtgtatgcccgagaaatgctggctgtgaaaacc
gagctccctgaagaccggatacaggtctggtttcaaaaccgcagggccaaatggcgcaag
cgggagaagcgctggggcggcagcagcgtgatggccgagtacgggctgtacggggccatg
gtgcgccactgcatcccgctgcccgactccgtgctcaactccgccgagggcggcctgctc
ggctcctgcgcgccctggctcttggggatgcataaaaaatccatggggatgataaggaag
ccaggaagtgaagataagttggcagtactctggggctctgaccgcctcaaagaaggttct
agccagagtcaggcaggaccacagagaggctcggataaagtgagccctgagaatgccttg
gaagatgtggcgatggacctctccagctctgcccggccggagaccaagaaagtgcaccca
ggggctggtgctcaaagagaatccaactccacggcactggaggggtcccagccagggaag
gcgggagccgtatga
DBGET
integrated database retrieval system
