Callithrix jacchus (white-tufted-ear marmoset): 100414323
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Entry
100414323 CDS
T03264
Symbol
RBFOX1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA binding protein fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjc03041
]
100414323 (RBFOX1)
Spliceosome [BR:
cjc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
100414323 (RBFOX1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
100414323
NCBI-ProteinID:
XP_035121998
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All DBs
Position
12:5088204..7696412
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AA seq
715 aa
AA seq
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MQDKRKTRWLWLMPTLSGRPXSSLLLGQGDHRGATWPGPGGGAGPGWSGPGPGEGTTTDP
TAWAGAGERGAGXGPASPRCARAASRGRQRARSGPLRSPRRPRCPAPRGADPPSPRSDAP
XSAERPLAPAPSSSRSAGRAPGAMASPSGSSEATGKPRGRDGRPRREEDDVPPEEKRLRL
GPEDGEDAPRPGREETGTQTGGDGRGDLLSLPYGLVEGQDYKSENSPLLPSAKNSLQDSV
SASQASGTVEESARRTHASGTYSFLDQTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQL
RGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTPVPEHTLNLYPP
AQSHSEQSPADTSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRF
RDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEV
NNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLV
YTSAMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQDGFYGAD
IYGGYAAYRYAQPTPATAAAYSDRNQFVFVAADEISCNTSAVTDEFMLPTPTTTHLLQPP
PTALVPCPKVPAPAQTSEELSCTLPGLCCQAAENLTASPPLLQFMFKVIVAQERK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataagagaaagacaaggtggctgtggctgatgcccaccctctcgggacgtcct
ntctcttccctcctccttgggcagggagaccatcggggtgcaacctggccggggccgggt
ggaggtgcaggccctggctggagtgggcctggccccggggaggggacgacaaccgatccg
accgcctgggccggggcaggtgagcgcggcgcaggcncgggcccggcgagtccgcggtgc
gcgcgagcggccagcagagggcgccagagagccaggagcggcccgctgaggagcccgcgc
cggccccgatgcccagctccgcgcggcgcggacccaccgagcccgcgctcagacgcccca
ngctccgcggagaggccgctcgcgccggctccttcctcctcccgaagtgcaggcagagcc
cccggagccatggccagcccttccggcagctccgaagccacgggcaagccccgcggcagg
gatggccggcccaggagggaggaggacgacgtccctcccgaggagaagaggctgcggctg
gggcccgaggacggggaggacgcgccgcggccgggccgggaggagaccggcacccagacg
ggcggcgacggcagaggagatctactgtcgctgccatacggcctggtcgagggtcaggac
tacaagtctgaaaactcacccctcctccccagtgccaagaacagcctgcaagactccgtt
tcggcaagtcaggcatcaggcacagtcgaggaaagtgctcgaagaactcatgcaagtgga
acttacagcttccttgatcagactcagcattcagatatcaaagcagactgcaatacctgc
gtggaaatagaagacagaaaggtttcaagacaacagatgaattgtgaaagagagcagcta
aggggtaatcaggaagcagctgctgcccctgacacaatggctcagccttacgcttcggcc
cagttcgctcccccgcaaaacggtatccccgcggaatacacagcccctcatccccaccct
gcgccagagtacacaggccagaccccggttcccgagcacacgttaaacctgtaccctccc
gcccagtcgcactccgagcagagcccggcggacacgagtgcccagaccgtctccggcacc
gccacacagacagacgacgcagcaccgacggatggccagccccagacacaaccttccgaa
aacacggaaaacaagtctcagcccaagcggctgcatgtctccaacatccccttcaggttc
cgggatccggacctcagacaaatgtttggtcaatttggtaaaatcttagatgttgaaatt
atttttaatgagcgaggctcaaagggatttggtttcgtaactttcgaaaatagtgccgat
gccgacagggcgagggagaaattacacggcaccgtggtagagggccgtaaaatcgaggta
aataatgccacagcacgtgtaatgacaaataaaaagaccgtcaacccttacacaaatggc
tggaaattgaatccagttgtgggagcagtctacagtcccgaattctatgcaggcacggtc
ctgttgtgccaggccaaccaggagggatcttccatgtacagtgcccccagttcacttgta
tatacttctgcaatgccaggcttcccgtatccagctgccacagctgcggcagcctaccga
ggggcgcacctgcgtggccgcggccgcaccgtgtacaacacattcagggctgcagcgccc
ccgcccccgatcccggcttatggcggtgttgtttaccaggatggattttatggtgcagac
atttatggcggttatgctgcataccgctacgcccagcctacccctgccacggccgctgcc
tacagtgacagaaatcagttcgtcttcgttgcagcagatgaaatttcttgtaacacctct
gcagttacggacgagtttatgctgccgacccctaccaccacacacttgctccagccgcca
cctacggcgttggtgccatgccccaaggttccagccccagcacagacttcagaggagcta
agctgcacacttccaggcctctgctgtcaggcagctgagaatctgactgcctctcctccc
ctattacaattcatgtttaaagtcatagtcgcccaggaaagaaaatag
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