Corynebacterium jeikeium: jk2012
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Entry
jk2012 CDS
T00255
Symbol
dnaX
Name
(GenBank) DNA polymerase III, gamma and tau subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cjk
Corynebacterium jeikeium
Pathway
cjk03030
DNA replication
cjk03430
Mismatch repair
cjk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cjk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
jk2012 (dnaX)
03430 Mismatch repair
jk2012 (dnaX)
03440 Homologous recombination
jk2012 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjk03032
]
jk2012 (dnaX)
03400 DNA repair and recombination proteins [BR:
cjk03400
]
jk2012 (dnaX)
Enzymes [BR:
cjk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
jk2012 (dnaX)
DNA replication proteins [BR:
cjk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
jk2012 (dnaX)
DNA repair and recombination proteins [BR:
cjk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
jk2012 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_19
AAA_14
Mg_chelatase
Rad17
AAA_16
DEAD
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CAI38194
UniProt:
Q4JSL3
LinkDB
All DBs
Position
complement(2346640..2349543)
Genome browser
AA seq
967 aa
AA seq
DB search
MALYRKYRPATFAEVVGQSHVTEPLSVALDSGRINHAYLFSGPRGCGKTSSARILARSLN
CVEGPTSTPCGKCESCVSLAPGGPGNLDVTELDAATHNGVDDMRELRERAFYAPAESRYR
VFIIDEAHMISTAGFNALLKIVEEPPEHLIFIFATTEPEKLLQTIRSRTHNYPFRLLAPP
DMRGLLESVVSGEGVPVEDAVYPLVIRAGGGSPRDSLSIMDQLLAGAGPEGVTYNRALAL
LGVTDSTLIDRAVDALAEHDSAALFAVVDEVIDAGYDPRRFSEDLLDRFRDLLVVQAVPD
AFERGLVNAPEESRDVLREQAEKMGQATLTRCASLVNEGLAQMRGATAPRLLLEILCARM
ALPAAGMTVEALAQRVEALEKGNGGAVGTGAGRAGSGAGGSGAGTRAGTGVRGSRAEMFA
RRRKAAQDAAQQSASAQPEPAQAEPAQRVENAPEQNLTAGQEPAAEQPPARSVEPPEAVA
ENSPAKETAQEVSPGTAQGTERGTEPETAQETAEESPAIAEARRARDIMQRHRQASAAES
AAATEEPTPADTAKASSEASPAGSEPVEVSAEASTEASMEASAEAAATIDSDSWARIMDA
VHGLDLSAWIALRGASPRAAQPIPGEVHVDHHTGSLARLVSGPKNAEVYSQAIQDVTGSP
ARIVVYVGDEAIGAGATESTGSAGSARGSEGAEPAGGDEPGKSEPAAAQPSAGEGQTPAS
TPVNPVPAETPMDATASRSAASSALERARAMEEAMRKASHSHRNAGAAAGTGAAGAAAGA
GTVANSSESAAQEDPNSGWRARAERAKARKKYNMENGFNGVPLPDEPPVDAYGDAPVDTW
DGSTAASAAANPGANPAADAPLPPEPSDPTDLSAPSDQSGQPGPAVPPAASGPSARTGEA
SPRAASHQPRAGVGSAGNEGASQRTEQNERDELLADLERAPGQRDHRTPLEIAGELIEKS
LGAERVR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
gtggcactttataggaaatatcgtccggcgacgtttgccgaggtcgtggggcaatcccat
gtgactgagccgttgtcggtggcgctggatagcgggcggatcaaccacgcatacctgttt
tccgggccgcgtggctgcggcaagacgtcgtcggcgcgcatcctggcccgctcgctgaac
tgtgtggaagggccgacgtccacgccctgcggaaagtgcgaatcttgtgtatcgctggcg
cccggcgggccggggaacttggacgtcacggagctggacgccgccacgcacaacggcgtg
gacgacatgcgcgaactgcgcgaacgtgccttctacgcacctgcggaatcgcgctaccgg
gtgttcattattgacgaggcgcacatgatctccacggcgggcttcaacgccctgctgaag
atcgtggaggagccgccggagcacctgatcttcatcttcgccacgacggagccagagaag
ctgctgcagacgattcgctcccgaacccacaactacccattccgcctgctggcgccgccg
gatatgcgcggactgttggagtcggtggtgtccggcgagggcgtgcctgtggaggatgcg
gtgtatccgctggtcatccgcgcgggtggcggttcgccgcgtgactcgctgtcgattatg
gaccagctgctggccggtgctgggccggagggcgtgacgtacaaccgcgcgctggctctg
ctgggcgtgacggattccaccctgatcgaccgtgctgtggatgcgctggcggagcacgat
tccgccgcactgttcgcagtggtcgacgaggtgattgatgcggggtacgacccgcgccgc
ttcagcgaggacctgctggaccgcttccgcgatctgctggtggtgcaggcggtgccggat
gctttcgagcgcggtctggtgaacgcaccggaggaatctcgcgacgtgctgcgcgagcag
gcggagaagatgggccaggcgacgctgacgcgctgcgcatctctggtgaacgaggggttg
gcgcagatgcgcggcgccacggctccgcgactgttgctggagatcctgtgcgcacgcatg
gcgctgcctgccgctggcatgacggtggaggcgctggcgcagcgcgtggaggccctggag
aaggggaatggcggtgctgtcggaacgggggccggaagggcaggctccggcgcgggcggc
agcggtgctggcacgcgcgctggtacgggcgtgcgcggcagccgagcggagatgtttgcc
cgccgcaggaaggccgcgcaggacgcagcgcagcagtctgcatcggcgcagcctgagcca
gctcaagctgaaccggcacagcgtgtagaaaatgcgccggagcaaaatctgacagcagga
caggagccagccgcggagcagcctccggctcggtccgttgagccccccgaggcggttgcg
gagaattccccggcgaaggaaaccgcacaggaagtctcgccggggactgcgcaaggtacg
gagcgggggacggagcccgagactgcgcaagagacggcagaggagtccccggccattgcc
gaggcgcgccgggcccgcgacatcatgcagcgtcaccgccaggccagcgccgcggagtct
gccgctgcaacggaagagcccacaccagcggatactgccaaagcaagctcggaggcatca
ccggcaggctccgaaccggtagaggtttcggcagaggcttcgacggaagcttcgatggaa
gcttctgcggaagcagccgccacgattgattcggactcctgggcgcgcatcatggacgcc
gtccacggcctggacctcagcgcttggatcgccctgcggggcgcttccccgcgcgcagcc
cagcccattccaggcgaggttcacgttgaccaccacaccggttcactagcgcggctagtc
agcgggccgaaaaatgcggaggtgtattcacaggctatccaggacgtcacaggtagcccc
gcccgcatcgtcgtctacgtcggcgacgaggctattggtgccggtgccaccgaatcgacc
gggtcggccggatcggccaggggctctgaaggagccgaacctgcgggaggcgatgagccg
ggaaaatctgaaccggcggcggcacagccctccgccggtgagggacaaacgccagcttcc
acaccagtgaaccctgtgccagcggaaaccccgatggacgcaacggcctcccgcagcgca
gccagcagcgccctggagcgtgcccgcgcgatggaggaagcgatgcgcaaggcctcgcac
tcccaccgcaacgcaggcgcagctgcgggcacgggtgcagcgggtgccgctgcaggggcc
ggaacagtagccaattcgagtgaatccgccgcgcaggaggacccgaactccgggtggcgc
gcccgcgccgaacgagccaaggcccgcaagaagtacaacatggaaaacggcttcaacggc
gtccccctgcccgacgagccgccagttgatgcctacggagacgcacccgttgatacctgg
gacggcagcacggccgctagcgccgctgccaacccaggtgccaacccagctgccgacgcg
ccgctcccgcctgaaccctccgaccccaccgacctgtcggcgccttccgatcagtctgga
cagcctggccccgccgtgccgcctgcggcatctggaccttccgcacggacgggagaagcc
tcgccccgagcggctagccaccagccccgcgctggggtgggctctgccggaaacgagggg
gcgtcacaaagaacagaacaaaacgaacgcgacgaactactcgccgacctagagcgcgca
cccggccagcgcgaccaccgcacgccgctggaaatcgcaggtgaactgatcgaaaagagt
ctgggtgcggagagagttcgctaa
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