Coturnix japonica (Japanese quail): 107306658
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Entry
107306658 CDS
T04297
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03022
Basal transcription factors
cjo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107306658
09124 Replication and repair
03420 Nucleotide excision repair
107306658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107306658
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107306658
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
107306658
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
107306658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
107306658
NCBI-ProteinID:
XP_015705462
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All DBs
Position
Z:64450599..64457857
Genome browser
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRIYEHHGQVRLGMMRH
LYVVIDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQMGLIVTKSKRAEKMTEL
SGNPKKHIVALKKAVDMNCQGEPSLYNSLNLAMQTLKHMPGHTSREVLIVFSSLTTCDPA
NIYELIKSLKAMKIRVSVIGLSAEVRVCTVLTRETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPCLTLDGYFCPQCRAKYSE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYQGERYCQGCQAEFKDQSVFVC
KMCKNAFCVECDMFVHDSLHCCPGCIHEHPTPASV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcccgagaggaccaagcgctgggaaggaggctacgagagaacatgggaa
atactgaaagaagatgaatccgggtcgttgaaggcaaccatcgaggatatcctgttcaag
gccaagaggaaaagaatctacgaacaccatggacaagtccggctgggaatgatgcgtcac
ctttatgtggttattgatggatccagaacgatggaggaccaagatttaaaacccaacaga
ctcacttgcactttgaagttactggaatattttgttgaagagtactttgaccagaatccc
attagtcagatgggcttaattgtaaccaagagtaaaagagctgagaaaatgacagagctt
tcaggtaacccaaaaaagcacatagttgctctaaagaaagcggtggatatgaactgccaa
ggagagccatctctatataattccctaaacttggccatgcagactttaaagcatatgcca
ggacatacaagcagagaggttttaatagtcttcagcagtcttacaacatgtgatccggct
aacatctatgagctaatcaagagtttgaaagcaatgaagatcagagtgtctgtcattggt
ctgagtgctgaagttcgagtctgtacagtactgacccgagaaactggaggcacataccac
gttattttagatgaaagccattataaggaactgctgatgcatcacgttagtcctccaccc
gccagttccagttcggagtgctccctgattcgaatgggttttccccagcacaccattgct
tccctttctgaccaagatgcaaagccatccttcagcatggcacaactggaaaacaacagt
gagccatgtcttacactggatgggtatttctgtcctcagtgcagagccaaatacagtgaa
cttcctgtggaatgcaagatctgcggtcttacactggtgtctgcacctcatctggctcgg
tcttaccaccacctgtttcctttggatgcctttcaggaaattccactggaggaatatcag
ggagaacggtattgtcaaggctgccaagcagaattcaaagatcaaagtgtgtttgtatgt
aaaatgtgcaagaatgcattttgtgtggagtgtgacatgtttgttcacgactccctgcac
tgctgtcctggctgtattcatgagcaccccactcccgcatctgtatga
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