Coturnix japonica (Japanese quail): 107308849
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Entry
107308849 CDS
T04297
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107308849 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjo01002
]
107308849 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cjo00536
]
107308849 (SHH)
Peptidases and inhibitors [BR:
cjo01002
]
Cysteine peptidases
Family C46: hedgehog family
107308849 (SHH)
Glycosaminoglycan binding proteins [BR:
cjo00536
]
Heparan sulfate / Heparin
Morphogens
107308849 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
107308849
NCBI-ProteinID:
XP_015708514
UniProt:
A0A8C2SU13
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Position
2:complement(7177064..7186550)
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AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEHGGTKLVKDLSPGDRVLAADTDGRLLYSD
FLTFLDREDGSRKLFYVIETRQPQARLLLTAAHLLFVAPQHNQSEANGPASGQALFASNV
KPGQRVYVLGEGGRQLLPASVHSVSLREEASGAYAPLTAQGTILINRVLTSCYAVIEEHS
WAHWAFAPFRLAQGLLAALCPDGAIPSAGTTTTGIHWYSRLLYHIGSWVLDGDALHPLGM
VAPAS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggaggcaccccaaa
aagctgaccccgttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagttgaactccctggccatctctgtgatgaaccagtgg
ccgggggtgaagctgcgggtgaccgagggctgggacgaggacggccaccactccgaggaa
tcgctgcactacgagggtcgcgctgtggacatcaccacgtcggatcgggaccgtagcaag
tacgggatgctggcccgcctggccgtcgaggccggcttcgactgggtctactatgagtcc
aaggcgcacatccactgctcagtcaaagcagaaaactcagtggcagccaaatcaggaggc
tgcttccctggctcggccacagtgcacctggagcatggcggcaccaagctggtgaaagac
ctgagccctggggaccgcgtgctggctgctgacacggatggccggctgctctacagtgac
ttcctcaccttcctcgaccgggaggacggctcccgaaagctcttctatgtcatcgagaca
cggcagccccaggcccggctgctgctgacagctgcccacctgctctttgtggccccccag
cacaaccagtcagaggccaatgggcccgccagtggccaggcactctttgccagcaatgtg
aagcctggccaacgtgtctatgtgctgggagagggcgggcggcagctgctacctgcatct
gtccacagcgtctcattgcgggaggaggcatccggagcctacgccccgctcaccgcccaa
ggcaccatcctcatcaaccgggtgctgacctcctgctacgctgttatcgaggagcacagt
tgggcccattgggcctttgcaccattccgcttggctcaggggctgctggctgccctctgc
ccagatggggccatcccttctgccggcaccaccaccaccggcatccattggtactcacgg
ctcctctaccacatcggcagctgggtgctggatggtgatgcactgcacccactgggcatg
gtggcaccggccagctga
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