Coturnix japonica (Japanese quail): 107314596
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Entry
107314596 CDS
T04297
Symbol
USP47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjo01002
]
107314596 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107314596 (USP47)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107314596 (USP47)
Peptidases and inhibitors [BR:
cjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107314596 (USP47)
Ubiquitin system [BR:
cjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107314596 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
ubiquitin
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
107314596
NCBI-ProteinID:
XP_015719467
UniProt:
A0A8C2STA5
LinkDB
All DBs
Position
5:complement(12465859..12513083)
Genome browser
AA seq
1377 aa
AA seq
DB search
MVPSEENQLVPKEDVFWSCRRSTLAELKKKFSQVESAAEEPRVLCIVQDTTNSKTVNERV
TLNVPASTPLKKLFEDVASKVGYVNGTFDLVWGNGDNGADMTPIDQNSDKTILDAGFEPG
KKNFLHLTDKDGEQPHIMQEESGTTEDSAQDRFIGPLPREGSVGCTNDYVSQSYSYSSVL
SKSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLF
VLLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQL
YQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPN
QYFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSIF
IDVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERIAKVGS
EKNSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSS
GSRGYYSSAFASSTNAYMLIYRLKDPARNAKFLESHEYPDHIKQLVQKERELEEQEKRQR
EIERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLREAVGIAYKLMDLEEAVPLDCCRLVK
YDEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHV
VDLKTESVAPPISVRAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLTVSSKT
LKAEGFFRSNKVFIESSESLDRHVAYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQFRRS
IYQKPSGDMGNLDEACERVKGPAGNMKSVEAILEESTEKLKSLSLQQQQQQEGDNGDSSK
STEASDFENIESPSNEIDSSASVENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVD
SDILSSSHSSDTLCNVDNAPIPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSE
YDESSKSRGETQYMYFKSEPYAADEGSGEGQKWLMVHVDKRITLSAFKQQLEPFVGVPSS
HFKVFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPC
KFLLDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEE
DINISSNWEVFLEILDGIEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEK
LSELSGIPLENIEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYR
DKTEELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggtgcccagcgaggagaaccagctcgtccccaaggaggatgtgttttggagttgcaga
cgaagtaccttggctgaattgaagaagaaattttcacaggtggaaagtgctgctgaggaa
cccagagtgctgtgtatagtacaggataccacaaattcaaagacagtgaatgaacgcgtt
accttgaatgtgccagcttccacgccacttaaaaagctgtttgaagacgtagcttcaaaa
gtgggctatgtgaatggaacctttgacttagtgtggggaaatggagacaatggagctgat
atgactccaatagatcagaacagtgacaaaactattcttgatgctggttttgagccaggg
aagaagaactttctgcatttgacagacaaagatggtgagcaacctcatataatgcaggag
gagtcaggtacaacagaagacagtgcccaggacagatttataggccctcttccaagagag
ggctctgttggctgtaccaatgactacgtcagtcaaagctactcttactcttcagtcctg
agcaaatcagagacaggttatgtgggcctggtaaatcaagcaatgacttgctacctgaat
agcctcttacaaacacttttcatgacgcctgaatttagaaatgcattatataagtgggaa
tttgaggaatctgaagaggatcctgtgaccagtatcccctaccagcttcaaaggctgttt
gttttactgcagaccagcaagaaaagagcaattgaaacaacagatgttacacggagtttc
ggatgggatagtagtgaggcgtggcagcaacatgatgtacaggagctttgtagagttatg
tttgatgctttggagcaaaaatggaagcaaacagaacaggccgatcttataaatcagctg
taccaaggcaaactgaaagactatgtacgatgtctagaatgtggctacgaaggctggaga
attgacacatacctggatattcctttggtcatccgtccatatggctccaaccaggcgttt
gctagcgtggaagaagcactgcatgctttcattcagcctgagattcttgatggccccaat
caatatttttgtgagcgatgtaagaagaaatgtgatgcaaggaagggcctgcggttcttg
cattttccatatctgttgacattacaactgaagagatttgattttgattataccactatg
cacagaattaagctgaatgatcgtatgacttttcctgaggagttagacatgagtatcttc
atagatgttgaagatgagaagtctcctcagactgagagttgcactgatagcggagcagaa
aatgaaggcagttgtcacagtgaccagatgagcaatgatttttctaatgatgatggagtt
gatgaaggaatctgcctggaaagcaacagtgcagcagaaagaattgctaaagttggcagt
gaaaagaattctttactgtatgaactcttctctgttatggtccattctggaagtgctgct
ggtggccattactatgcctgtataaagtcttttagtgatgaccagtggtacagctttaat
gatcaacatgttagcaagataactcaggaagatattaagaaaacatatggtgggtcttct
ggaagcagaggctactattccagtgcttttgctagctccacaaatgcatatatgctaata
tacagactgaaggatccagcaaggaatgcaaagtttctcgagtcacatgagtatcctgac
catattaagcaattggtacagaaagagagagaattggaagagcaagaaaagaggcaacgg
gaaattgagcgcaacacttgcaagattaaattgttctgtatgcatccaacaaaacaaata
atgatggagaacaaattagaagttcataaggatagaacactaagggaagctgtgggaata
gcttacaagctgatggatttagaagaggccgtccctttagattgctgtcgtcttgtcaaa
tatgatgagttccatgactacttggaacgatcttatgaaggcgaagaggatacaccaatg
ggtttattactcggaggtgtcaaatcaacgtacatgtttgacttactgttggaaacaaga
agacctgaccaaattttccagtgctataagcctggtgaggtcatggtaaaggttcacgta
gttgacctgaagactgaatctgttgctcctccaataagtgtacgagcttatttgaatcag
acagtttcagaattcaaacagctaatttcaaaggctacacatctgcctgcagaaacaatg
cgggtagtattagaacgttgctacaatgatttgcgtcttctgactgtatccagcaaaacg
ctgaaagctgaaggcttttttagaagcaataaggtgtttattgaaagctcagagtcttta
gaccgtcatgtggcatatacagattctcacttatggaaacttctggatcgtcatgcaaat
acaatcagactgtatgtctcattaccagagcagtcgcctggatctcagttcagacggtcc
atttatcagaagcctagtggagatatgggcaacttggatgaagcctgtgaaagagtaaaa
ggacctgcaggcaacatgaaatctgttgaggcgattctggaagaaagcactgagaagctt
aagagtttgtccctgcagcagcagcagcaacaggagggtgataatggagacagcagcaaa
agcacagaagccagtgattttgaaaatatcgaatccccttcaaatgaaatagactcttca
gcatcagtagaaaacagagaacttgaaaaccaaattcagatttctgatccagaaaacctc
cagtctgaggaaaggtcagattcagatgtaaataatgacaggagcacgagttcggtggac
agtgatatccttagttctagtcatagcagtgatactctatgcaatgtggacaatgccccg
attcccttggctaatggactggattctcacagtatcacaagtagtaggcgatcaaaagca
aatcaggggaagaaggaaacctgggacacagcagaagaagattctggcacagacagtgaa
tatgatgaaagcagcaagagcagaggagaaacacagtacatgtactttaagtcagagccc
tacgctgcagatgaaggttcaggagaagggcagaaatggttgatggtgcatgttgataaa
agaattacactgtctgccttcaagcaacagttggagccttttgttggagttccatcctct
cactttaaagtctttagagtctacgccagcaatcaagagtttgagagtgttcggctcaat
gagacgctttcatcattttctgatgacaacaagataactattagacttggaagagccctt
aagaagggtgaatacagagtcaaagtctatcagcttttggtaaatgaaccagagccatgc
aagtttcttctagatgcagtttttgctaagggtatgactgtccgacagtccaaagaggag
ctactcccacagcttcgagagcagtgtggcctggacttaacaattgacaggtttcgtcta
cggaagaaaacctggaagaacccagggactgtgtttctggattatcatatctatgaagaa
gatatcaatatctcaagcaactgggaggttttcctagaaatacttgatggaattgaaaag
atgaaatctatgtcacaacttgcagttttatcgagacgatggaggccatcagagatgaag
ctagattctttccaggaagtagtgctagaaagcagcagtgttgaggaattaaaagagaag
ctgagtgaattaagtggaatacccttagaaaatattgagtttgcaaagggtagaggaaca
tttccttgtgacatttctgtcctagagattcaccaagacttggactggaatccaaaagta
tctacattgaatgtctggcctctgtacatttgtgatgacggcgcagtaatattttatagg
gataaaaccgaagaattaatggaactaacagacgaacagagaaacgaacttatgaaaaaa
gaaagcagcagactccagaaaactggacaccgggtaacctactcccctcgtaaagagaaa
gcactaaaaatttatctggatggagcaccaaataaagatttgactcaagactga
DBGET
integrated database retrieval system
