Coturnix japonica (Japanese quail): 107314932
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Entry
107314932 CDS
T04297
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107314932 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107314932 (VTI1B)
Membrane trafficking [BR:
cjo04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
107314932 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
WXG100
Fusion_gly
ETRAMP
Laminin_II
Snapin_Pallidin
DUF3958
Motif
Other DBs
NCBI-GeneID:
107314932
NCBI-ProteinID:
XP_015720256
LinkDB
All DBs
Position
5:27590227..27596447
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AA seq
305 aa
AA seq
DB search
MGAMGGAGRGGAEHHEAALRLRLPAGSAPPGPRSAWAAPVPRSGSAGRLIAQARVLAADG
GSGAGQCPVRPIAMAERGPASSEHLERLHEIFRGLHGELRAVPERLRGGAAEEKKKLIRE
FDEKQREANETLREMEEELKYAPLPFRNQMMSKIRAYRRDLSMFQREMRSTDLGLGPGSQ
GDMKYGIFSTENEQSTNLQSQRVLLLQGTDSLNRASQSIERSHRIAAETDQIGTDIIEEL
GEQREQLERTRSRLVNTSENLSKSRKILRSMSRRIATNKLLLMIIIVLELAILGGVVYYK
FFRSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggagcaatgggcggtgcagggcggggcggggcggagcaccacgaggcggcgctgcga
ctacggctcccagcgggcagcgcgccgccaggaccccgctccgcctgggctgccccggtg
ccgcggtcaggcagcgcggggcgtctcattgcgcaggcgcgggtcctcgcggccgatggc
ggaagcggcgccgggcagtgccccgtacggcccatcgccatggcggagcgcggccccgcg
tcctccgagcacctggagcggctgcacgagatcttccgcgggctgcacggggagctgcgc
gccgtgccggagcggctgcggggcggcgcggcggaggagaagaaaaagctgattcgggag
tttgatgagaagcagcgtgaagcaaatgaaacgctccgggaaatggaagaagaactgaag
tatgctcctctaccattccgcaatcaaatgatgagcaaaatccgggcatacagaagggac
ctctccatgttccagagggagatgagaagcacagatttgggactgggccctggaagtcaa
ggggatatgaaatacggaatcttttccacagaaaatgaacagagtactaatctgcagtca
cagagggtgctgcttctccaaggaacagacagtctgaaccgagccagtcagagcattgag
cgctcacaccggattgctgctgaaacagatcagattggtactgatatcattgaagaactt
ggggagcagagagagcaactggaacgcaccaggagcagattggtgaatacaagtgaaaac
ttaagcaagagtcgtaagatactgcgttccatgtccaggagaatagccactaataagttg
ttgctgatgatcatcatcgtcctggaactagccatcctaggaggtgtggtctactacaaa
ttctttcgcagtagatga
DBGET
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