Coturnix japonica (Japanese quail): 107315485
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Entry
107315485 CDS
T04297
Symbol
FANCM
Name
(RefSeq) Fanconi anemia group M protein isoform X1
KO
K10896
fanconi anemia group M protein
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107315485 (FANCM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107315485 (FANCM)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
107315485 (FANCM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCM-MHF_bd
DEAD
Helicase_C
ResIII
ERCC4
Motif
Other DBs
NCBI-GeneID:
107315485
NCBI-ProteinID:
XP_015721382
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All DBs
Position
5:complement(53309483..53362310)
Genome browser
AA seq
2065 aa
AA seq
DB search
MSGSRQRSLPELWLRDAARAVQAGPGAANNSDHDDDELLAAAAAELDPEPNPNPNPDPGP
EAAAAGFCPLAGALWIYPTNRPERPYQLRMARTALLANTLLCLPTGLGKTFVAAVVMYNF
YRWFPSGKVLFLAPTKALVAQQMEACAELMGIPGRDMAEMTGGTQAQSRRELWAARRVLF
LTPQVMVNDLSRGTCPAMHIKCLVVDEAHKALGNHAYCQVVKELSRHTRQFRVLALSATP
GSDTKAVQQVVSNLLIAQIELCTEDSPEIQPYSHERQVEKIVVPLGEELGGIQRDYIHVL
EAFAGRLIKMGVLSRRDIPSLTKYQVILARDQYRKNPSPQNMGMQQGIIEGDFALCISLY
HGYELLQQMGTRSLFIYLCGIMDGSKGLTRTKNELGRNEDFMRLYQQLADMFSDVCQTSA
NGNPHKSKSVSESKKEFIYSHPKLKKLEEIVIEHFESRRKGGSEDQTRSGSPSVSTRVMI
FSSFRDSVQEIAEMLSRFSPVVRVMTFVGHSTGKSTKGFTQKEQLEVVKRFREGGYNTLV
STCVGEEGLDIGEVDLIVCFDAQKSPIRLVQRMGRTGRQRQGRVVVILAEGREERTYNQS
QSNKRSIQKAISGNKMLHFYQHSPRMIPEGINPELHRMFITAEKYEPTDSRKLSRGRPSS
LHHKSALFSSVTDPKEMHCHGNWSLSPGEFEIWDRLYRLKESDGVKEPILPRTRFETLEN
LDETSKPEEEAAHKLSLSEWSIWQNRPFPTSIVEHSERCYHFISVMEMIEVMRQEQGDCS
YDLELQPHLRIEDVHGLRNKSHPSTTSSMLAQKTRLSKRDMARTKRTFVPDIGDHEREFF
SIFKTTNTKTPRTTTGLDLEEPELPTDTEASEPFSTGRFTPVESADLGSQKEEEIEKVMF
DLNEFNDLCDDGGSPVTHESAAVEDLGLLDKCCSSVEPNHRDLGYGSFTAEKSPVSSDLF
YLPESHVDSFVPMSSSEELSRLEAAFSRVKRLLARSPPPVSELEDSEKLLRHEETLCPLP
QLSCRSYSGQLPDKDFPSSLEVSHSLLPAESPELEVAADPGASDNPCLSKPASSSPAAAG
GAKERPPWGGSFHSLLGKEGFGANNTNNPSNKHFVQGDLEPNKKDVTVDEEKSIHLFEDE
HVYEANDEMTSVNVEPLLRSGSGRHTAGPDPKLLPSGPGCPHGDTACREGAARGETAPRG
AWGHGSVTEQALHTSDLCDYSQELFSVNFDLGFSIEECEEEITEGMDAMNAPELNSASGS
RAGVQLTANRKSLNDGCRIQTSPKWDCRDLEGRNVSTPRLQQSRNVRDTAVPGGTPGGRT
GRRPQGASPPSPPTPTGRKVNSAEATKRICKNVFSAVTEEVPEVRPMDKENANSQRKSFR
SSALDALDPTGRRTENLEGTNLHTSCVFPAEGTSSESEEEIVFQRKNKRNNVLKSPDVSL
NGEKMKRNKMTGCIQRQNKAPLCNNFFLSAQVVNDSDCESPVRAVRKRRHPRAVSDVSSD
DSVDFQKIPDRSCRGCSAVGTTAQHRGVKRPKVRSSVTRKDAARQFLDEEAELSQQDESC
VSSDETEDTDKELSSSITQFLNDDTEVTQVLNDSEMRGVYLKSVRSPALGSRYKMVHREF
DSTEIFSQIPEQDETYVEDSFCVVEGEEETCRKSEWSEEEEEVCVNFELLNDESFGGAGR
RYLTRRRKKLHGAKMEQNRSAPVQKKPSRIIVLSDSSGEETSVSNEKGTATHCSRAEQDN
PELLTSLPSVSSVPHKRMAGDSRGHQSADSKSGTLLGLKAAVSDMLDFHPGPQSSAGKAA
LHAPAEPLQLQRSVKDTSTKAPPAPLGSDTALCVLVDSREISSGADVISSLKAVHGVKVQ
VCSLGSSDYVVSNRMAVERRFLSELLSSANRNKVTQRLQHLHSMFERVCVIVEKDRTKPG
ETSRFLQRTQHYDATLAALLQAGIRLLFSSCQEETALLLKELALVEQRKKAAICVPTEVQ
GHKQDMLNFYLSIPNISYLAALNMCHHFGSVRTMVNSSPSDIAAGAQVSLQRAEETYRYL
RYGFDVHMLPENLCAKGKSSSTTRS
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccggttcccggcagcgctccctgcccgagctgtggctgcgggacgcggctcgtgct
gttcaggccgggccgggggcggccaacaacagcgaccacgatgacgacgagctgctggcg
gctgcggccgcggagctggacccggagccgaacccgaacccgaacccggatccgggcccc
gaggcggcggccgccgggttctgcccgttggcgggcgcgctgtggatctacccgaccaac
cggcccgagcggccgtaccagctgcgcatggcccgcacggcgctgctcgccaacacgctg
ctgtgtctgcccacagggctgggcaagaccttcgtggccgccgtggtgatgtacaacttc
taccgctggttcccgtccggtaaagtgctgttcctcgcgcccaccaaagcgctggtggcg
cagcagatggaggcgtgcgccgagctgatgggcatccccggcagggacatggccgagatg
acgggcgggacgcaggcgcagagccgcagggagctgtgggccgccaggagggtgttgttc
ctcaccccgcaggtcatggtcaacgacctgagcaggggaacctgccccgcaatgcacatc
aagtgcctggtggtggacgaggcgcacaaggcgctggggaaccacgcgtactgccaggtg
gtgaaggagctgagcagacacaccaggcagttccgggtgctggccctgagtgcaacgccc
ggcagtgacaccaaggctgtacagcaggttgtttccaacctgctcattgctcagatcgag
ctttgtactgaagattccccggagattcagccttattcacatgagcggcaggtggaaaaa
atcgtcgttcctctgggtgaagagctgggtgggattcagagagattacatccacgtgcta
gaagcgtttgccggacgcctgatcaaaatgggagttttatccaggcgggacatccccagc
ctcaccaagtaccaggtcatcctagcgagggatcagtacaggaaaaacccctccccacag
aacatggggatgcagcaaggcataattgagggagattttgcactttgtatcagtttgtat
catggttacgagctgctgcagcaaatgggaacacgatcgttattcatctacctttgtggc
attatggatggatcgaaaggattaactcgtacaaagaacgaacttggtcgcaatgaggac
ttcatgaggctgtaccagcagctggcagacatgttttcagacgtgtgtcagacttcagca
aatggaaatcctcacaagagtaaatcagtgtctgaaagtaaaaaggagtttatttacagt
catccgaaattaaagaaattggaggaaatagtgatagagcactttgagtcccggaggaag
ggcggttctgaagatcaaaccaggtccgggagcccatctgtgagcaccagggtgatgatc
ttctcttcgtttcgggatagcgtgcaggaaattgcagaaatgctgtcccggttcagccca
gttgtcagagtgatgacttttgttgggcactccacgggaaagagcacgaagggcttcacc
cagaaggagcagcttgaggtggtaaaacgctttcgtgagggtggctacaacaccctggtg
tcgacgtgtgtcggagaagaaggtttggacattggggaagtcgatctcattgtctgcttt
gatgcccagaagagcccgatccggctggtgcagcgcatgggccgcacggggcggcagcgg
cagggccgggtcgtcgtcatccttgctgaggggcgagaggagcggacttacaaccaaagc
cagtccaacaaaaggagcatccagaaagctatttcaggaaacaaaatgcttcacttttac
cagcacagcccgcggatgattccagaaggcataaatccagagttgcaccgaatgtttatt
actgctgaaaaatacgaaccaaccgattcaagaaagctttccagagggagacctagttct
ctccaccataaatctgctctcttctcctctgtcactgatccaaaggaaatgcactgccat
gggaactggtctctgtcacctggggaatttgaaatatgggacaggctgtacagacttaaa
gaaagtgatggagtgaaggagccaatactgcctcgcactcgctttgagaccttagagaac
ctggatgaaacatcaaaacctgaagaggaggcggctcataaactgtccttgtctgagtgg
agtatttggcagaatcgtccttttcctacaagtattgttgagcactctgagcgctgctac
cactttatcagtgttatggaaatgatagaagtgatgagacaagaacagggagactgcagc
tatgacctggagcttcagcctcacctacgcattgaagacgttcatggtctaaggaataaa
agccatccttccacaaccagttccatgttagctcagaagactcgcttgtctaaaagagac
atggcacgcacaaaaaggacgtttgtacctgatatcggtgaccatgagagggaattcttc
tctatatttaaaacaacgaacacaaagactcccagaacaacaactgggctggatttggag
gagcctgagttgcctacagacaccgaagcttcagagcccttctcaacaggaaggttcact
ccagtggagagtgctgacctgggcagccaaaaggaggaggaaatagagaaggtgatgttt
gacttaaatgaatttaatgacttatgtgacgatggtggaagtcctgtaactcatgaaagt
gcagcagtagaggatctcgggttgttagataagtgctgcagttcagtggagccgaatcac
agagatctgggctatggcagcttcacagctgagaaatcgcctgtgtcctctgacttattt
tacctcccagaatcacacgtggattcctttgttcctatgagctcctctgaggagctttcc
aggctagaagcagcgttttcccgtgtgaagaggctgttagcacgttctcctccccctgtc
agtgaacttgaagattctgaaaagttgttgagacatgaggaaacactgtgccctcttcca
cagctgtcctgcaggagttattcagggcaactgccagacaaagactttccctcttcctta
gaagtctctcactctctgctgcctgctgaaagtccggagctggaggtcgctgctgaccca
ggtgcttctgataatccctgcctttcaaaacctgcatcgtcttcgccagcagctgctggt
ggagccaaggagaggcctccatggggtggcagcttccacagtctgttgggcaaggaggga
ttcggagcaaataacacaaataacccttcaaataaacactttgttcaaggagatttagag
ccgaacaagaaagatgtgactgttgatgaagagaagagtatacatctgtttgaagatgaa
catgtctatgaagcaaatgatgaaatgacgtctgtgaacgtggagcctttgctcaggtcg
ggttcaggcagacacactgcagggccagacccaaagctgctgccctcagggccgggctgc
ccacatggggacacagcctgcagggaaggggcagcacggggggaaacagcacccagggga
gcgtggggccatggcagtgtgactgagcaggccctgcacaccagtgacctctgtgactat
tctcaggagctgttttctgttaacttcgatctggggttttccattgaagagtgtgaggag
gaaatcactgaaggcatggatgccatgaatgcccccgagttaaacagtgcctcggggagt
cgtgcgggtgttcagctcaccgccaatagaaaatctctgaatgatggctgcaggattcag
acatcaccaaaatgggattgcagagatctggagggaagaaacgtttccacaccacggctt
cagcagagcagaaacgtgagggacacagcagtgcccggggggacaccagggggcaggacg
ggacggcggccacagggagcctcacctccttcacctcctaccccaacgggcagaaaggtg
aacagtgctgaagctactaaaaggatttgtaagaacgtgttctctgctgtcacggaagaa
gttccagaggttcgtcctatggataaagagaatgcaaactcacagagaaagagctttagg
agttcagccttggatgcgcttgatcccactggaagaagaactgagaacctggaaggcacc
aaccttcatacttcatgtgtgtttcctgcagaaggaaccagcagtgaaagtgaagaagag
attgttttccagaggaaaaataagagaaacaatgttttgaagtctcctgatgtgagtctt
aatggggaaaagatgaagagaaacaaaatgacgggatgcatccaacgtcagaacaaagct
ccactctgcaataacttctttctgtctgcacaggttgtgaatgacagtgactgtgaatca
ccggtccgtgctgtcaggaaacgccgacacccacgggctgtgtccgacgtgtccagtgat
gacagcgtggattttcagaagatcccagacaggagctgcaggggctgctcagcagtgggc
accacggcacagcacaggggtgtgaaacgtccgaaggtcaggagcagcgtcacacgtaag
gatgcagcaagacagttcttagatgaagaagcggagctgtcccagcaggatgagagctgt
gtttcctcggatgaaactgaagacacagacaaggagctgagctcctcaatcactcagttc
ctgaatgacgacacagaggtcacccaagtgttaaatgactcggagatgagaggcgtttac
ctgaagtccgtgcgcagcccagcgctggggagcagatacaagatggtgcatcgggagttt
gacagcactgagattttctcacagatcccggagcaagacgagacctacgtagaagacagc
ttctgtgttgtggagggggaggaggagacgtgcagaaagagtgaatggagtgaggaggag
gaggaggtgtgtgtcaactttgagctcctgaatgatgagagttttggtggtgcaggacgg
cggtacctcactcggcggaggaaaaaactacacggggccaagatggaacagaaccgctca
gcaccagtgcagaagaaaccatcccggattattgtcctcagtgactccagtggggaggaa
acgagtgtgagcaacgagaagggcacggcaacacactgctccagggcagaacaggacaac
cctgagctgctcacatcactgccttcagtctcttctgtgccacataagagaatggctggg
gacagccgtggccatcagtctgcagacagtaagagtgggacgctgctgggcttgaaggcg
gctgtatctgatatgctggacttccacccggggcctcaatccagcgcagggaaggcggct
ctccatgctcctgccgagcccttacagctgcagcgctcagtgaaggacacttccaccaag
gcccctccagctccgctgggcagcgacactgcgctgtgtgtcctggtggacagccgcgag
atctcctctggcgcagacgtcatctcctccctgaaggccgtccatggggtgaaggttcag
gtctgctcgctgggcagcagcgattacgttgtcagtaaccgcatggcagtggaaaggagg
ttcctgtcggagctgctgagctctgcgaacaggaataaagtcacccagcgcctgcagcac
ctgcacagcatgtttgagagggtgtgtgtcatcgtggagaaggacaggaccaaaccaggg
gaaacctcgaggttcctgcagaggacgcagcactacgatgctacgctggctgcgttgctg
caggctggtatccggctgctgttcagctcctgccaagaggagactgcgctgctgctgaag
gagctggcgctggtggagcagaggaagaaggctgccatctgtgtgccaacagaggtgcag
ggccacaagcaggacatgctcaacttctacctgagcatccccaacatcagctacctggct
gccctcaacatgtgccaccacttcggctctgtcaggacgatggtcaacagctccccatca
gacattgctgctggtgcccaggtgagcctgcagcgcgccgaggagacgtaccgctacctg
cgctatggcttcgacgtgcacatgctgcccgagaatctctgtgcaaaggggaagagcagc
agcaccaccaggagctga
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integrated database retrieval system
