Coturnix japonica (Japanese quail): 107317547
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Entry
107317547 CDS
T04297
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cjo03036
]
107317547 (HFM1)
Enzymes [BR:
cjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107317547 (HFM1)
Chromosome and associated proteins [BR:
cjo03036
]
Eukaryotic type
Meiosis-specific proteins
Others
107317547 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
107317547
NCBI-ProteinID:
XP_015725875
LinkDB
All DBs
Position
8:12591054..12644678
Genome browser
AA seq
1423 aa
AA seq
DB search
MFSSADEVFSLENLFYERPDPKKRDLENKSDIWWIAPAPAIDEIPPAEELQRELETSTAS
SCMLGGIKHQKFIQQRKNITEEVNDKSPAPTHFGKASEKEMLRLCVGERTNKHESLQMTS
MFLSPDQAKYKIGTKIFQQPDADFSQTKILTNFPENGDDESVHSAFRRSLFKMPDCTYKN
TEFKDSSMHMKAVDTHFNTSENMTEAKKEIWRENRHPPVTADSGFTLHRSLSSASKILEM
TGTAGRNLEMLRAVTEIPTQFRCIFKEFPYFNYAQSKALDDLLYTDRNFVICAPTGSGKT
VMFELAITRLLMEVPMPWLNIKVVYMAPIKALCSQRFDDWKEKFGPIGLSCKELTGDTVV
DDLFEIHHAHIIITTPEKWDSMTRRWKDNSIVQLVRLFLIDEVHVVKDESRGATLEVVVS
RMKTVQSSLWRLSENRDVPPLRFVAVSATIPNAEDIAEWLSDGKVPAVCLKVDEDQRPVK
LRKIVLGFPCSDSQTEFKFDLTLNYKIASVIQAYSDQKPALVFCATRKGVQQAASILSKD
AKFLLSIEQKQRLQKSANSLKDSKLRELLMYGVAYHHAGMEVSDRKIIEGAFTAGDVPVL
FTTSTLAMGVNLPAHLVVIKSTMHYVGGVFEEYSETDILQMIGRAGRPQFDTTATAVIMT
RSSTREKYIQMLNGADVIESSLHRHLVEHLNAEIALRTVTDVTVALEWIRSTFLYIRALK
NPTHYGFSSGLDKNGIEAKLQELCLKNLNDLSSFNLIKMDKENNFKPTETGRLMAWYYIA
FDTVKQFFRIKGTETLKELVTMISNCAEFLDVKLRTNEKKLLNTLNKDKEKITIRFPMEG
RIKTREMKVNCLIQAHLGCIPVQDFTLTQDTGKIFRNGIRVTRWLSDFLASSKDNFTALL
NSLILAKCFRCKLWENSLHVSKQLEKIGVSLSNAMVNAGLTSFKKIEDTNARELELILNR
HPPFGNQIKESVLYLPKYELNIEQLPKYSDTMAEILVTTTLTNFEQLQTKRTASDFHYVT
LIVGDADNQVIFIQKIMDSVLLKSGNWMKKIEVKRALKSDDISISLISSDYVGLDIQQTY
TAFYLTPRTAGSKVVKNKLKAKSSLDTSCGTAQSLPAAKVDSGSRSREENTYKKYSNREC
NHRCKNKDVCGHDCCKTGVLPKSEMSGDSKFSLYLADLRSRNSTSSVPPVKRLKMQMLNQ
AQSVDLKQFVFAPKSSMPAPSRWQQSGNKESFSSSSVHQVDSFNNLGRSQKQFQSWDYGK
SDALCVNAELRDDVWDDLDDEVLVDASNFFSGELDECETLHNYSTSEATSDISEDSCLLQ
GSASMQNPVLSVFDSSSKVELSVQSGHTNTFTSQESKHSNLSQELEKVRPSISKIIPASS
KFTGKENFFIFMKEQEEGTEPSCLPDDETSDVTPLLGLLDDIF
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctctgcagatgaggttttttcattggaaaatttattttatgaaagaccagat
ccaaaaaaaagagatctagaaaacaagtcagacatttggtggatcgcacctgctccagca
attgatgaaattccacctgcagaggagctacagagggaactggaaacaagcacagccagc
agttgcatgttgggagggataaagcaccagaagtttatacaacaacgtaagaatatcact
gaggaagtaaatgacaaatcaccagcacctactcattttggcaaagcctccgaaaaagaa
atgctccgattatgtgtgggagaaagaacaaataagcatgaaagtctgcaaatgacttca
atgtttctctctcctgatcaggctaaatataaaataggaacaaagatttttcagcagcct
gatgcagatttctcacagactaaaatattaactaattttccagaaaatggtgatgatgag
agtgttcattcagcttttagaagaagcttatttaaaatgcctgattgtacatataaaaat
acagaatttaaagatagttcaatgcatatgaaagcagttgatactcattttaatacaagt
gaaaacatgacagaagcaaaaaaagagatatggagagaaaatcgtcaccctccagtgact
gcagactcaggttttaccctgcacagatcattgtccagtgcttcaaagatcctggagatg
acaggaactgcgggaagaaacttggaaatgctgagggctgttacagaaataccaacccaa
tttaggtgcatttttaaggagtttccatacttcaactatgcccagtctaaagctttggat
gatcttctttatacagatagaaattttgtgatttgtgctccaactggctctggaaaaact
gtaatgttcgaactagctattaccagattacttatggaagtcccaatgccttggttaaat
attaaagttgtttatatggctccaataaaagctctgtgcagtcaacgttttgatgattgg
aaagaaaaatttggacccataggactcagctgcaaggaactgacaggagatacagtggtg
gatgatttgtttgaaatacatcatgctcatattattatcactacacctgagaaatgggat
agcatgactagaaggtggaaagacaactctatagttcagcttgtgcgactgtttctcata
gatgaggtgcatgttgtaaaggatgaaagccgtggcgcaacattggaagttgtagtcagt
cggatgaagactgttcagtcttctctatggcgtctttcagagaatcgtgatgtccctcct
ttgagatttgtagcagtttcagcaacaattccaaatgctgaagatattgcagagtggctt
tcagatgggaaggtgcctgctgtatgtctgaaagtagatgaggatcaacgcccagtgaag
ctacgcaaaattgttcttggttttccttgcagtgacagtcagacagaattcaaatttgac
ttaactctgaactacaaaatagctagtgttatacaagcatattctgatcaaaaaccagcg
ctggtgttctgtgccacaagaaaaggagtgcagcaagctgcttctattctttcaaaagat
gccaaatttctactgagtatagagcagaagcaaaggttacagaagtctgcaaattcactg
aaagattccaagctcagagagcttttaatgtatggtgtggcttatcatcatgcgggcatg
gaggtttctgacagaaaaataattgaaggagcttttactgcaggagatgtacctgtactt
tttactactagcactttagctatgggagtcaatctgcctgcacatctggtggttataaaa
tccacaatgcactatgttggaggagtgtttgaagagtacagtgaaaccgatattctgcaa
atgattgggagagcaggaaggcctcaatttgacacaacggctacagcagtaattatgact
cgttcgagtacaagggagaagtatatacagatgttaaatggtgcagatgtaatagagagc
agcttgcacagacatcttgtggagcatttaaatgcagaaatagcattacgtactgtcaca
gatgtcactgtagctttggaatggatacgatcaacgttcttgtacattagagctttaaaa
aatccaactcattatggtttttcatctggattggataaaaatggaattgaagcaaaatta
caggaactctgtttgaagaacttgaatgatttatcatctttcaatttgatcaagatggat
aaagaaaataatttcaagccaacagagaccggaagattaatggcatggtattatattgca
tttgatacagtaaagcagtttttcagaattaagggaaccgaaactttaaaggaattggtt
acaatgatctccaactgcgcagaatttctagatgtcaagttgagaacaaatgagaagaaa
ttactgaatactttgaataaagacaaggaaaaaataactatcaggtttccaatggagggg
aggattaaaacaagagaaatgaaagtaaactgtctgattcaggctcacctaggatgcatt
cctgttcaagactttactttgacacaagatactggcaaaatatttagaaatggcataaga
gttaccagatggttatctgactttctggcatcaagtaaagacaactttactgcattatta
aactctctgattttagctaagtgtttcaggtgcaaactttgggaaaattcccttcatgtg
tctaaacaattggaaaaaattggtgtgtcactgtcaaatgctatggtaaatgctggactg
acatcatttaaaaaaatagaagacacaaacgcaagggaacttgaattgattttgaacaga
catcctccttttggaaaccagataaaagaatctgttttatacctcccaaaatatgaactt
aacattgaacagcttccaaaatacagtgatacaatggctgaaattttagtaaccaccaca
ttaacaaactttgagcagctacagacgaagagaacagcttcagactttcactatgttaca
ctgattgtaggagatgcagacaatcaagtaatttttattcagaaaataatggattctgtg
ctgctgaaaagtggaaattggatgaagaaaatcgaagtgaaaagagctcttaaatcagat
gacattagtataagtttaattagttctgattatgttggccttgatatacagcaaacatac
acagccttttacttaacaccaagaacagcgggaagtaaagtagttaaaaataaactgaaa
gccaagtcttctcttgatacatcttgtggcacagcacaaagtctgccagcagcaaaagtg
gattcaggaagcaggtctagagaagaaaatacctataagaaatacagtaacagagaatgt
aaccatcgctgtaaaaataaggatgtgtgtggacatgactgctgtaaaactggagtactt
ccaaagtctgagatgagtggagattcaaagtttagtttgtacctggctgatttaaggagc
aggaactctacctcgtctgtacccccagtaaagcggttaaagatgcagatgttaaatcag
gctcaaagtgtggatctcaaacaatttgtttttgcacccaaatcttcgatgccagcacca
tcaaggtggcaacaatctggcaacaaagagtcattttcatcatcttcagtgcaccaggta
gatagtttcaataacttagggagatctcagaaacaattccagtcctgggactatggaaag
agtgatgctttgtgtgtgaatgctgagctgagagatgacgtttgggatgatcttgatgat
gaagtattagtagatgctagcaactttttcagtggagaattagatgagtgtgaaaccctt
cacaactattcaacaagtgaagccacaagtgacatttcagaagattcttgtctattacaa
ggcagtgccagtatgcagaacccagttctctctgtgtttgatagctcatcaaaagtggaa
ttatctgtacagagcggacatacaaatacgttcacttctcaagaaagcaagcattcaaat
ctttcacaagagctggaaaaagtacgtccttcaatttcaaaaataatcccggcctcttct
aaattcactgggaaagagaatttttttattttcatgaaggaacaggaagaaggaacagaa
cccagctgtcttcctgatgatgagaccagtgatgtcacacctttactcggactacttgat
gacatattttaa
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