Coturnix japonica (Japanese quail): 107318076
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Entry
107318076 CDS
T04297
Symbol
U2SURP
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107318076 (U2SURP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107318076 (U2SURP)
Spliceosome [BR:
cjo03041
]
Complex A
U2 snRNP components
U2 related factors
107318076 (U2SURP)
Complex B
107318076 (U2SURP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
107318076
NCBI-ProteinID:
XP_015726958
LinkDB
All DBs
Position
9:9000430..9037358
Genome browser
AA seq
1093 aa
AA seq
DB search
MARPGEPWVPCSENGARLPEPCDGTVLPGRCYCRSAALAETETTETSFIPPTRPDNAPLC
ARTTGRSPHRCLGARLPVLSGRGRSVAIRGSALASSLPGLSEGRGKMADKASGGSQKGSG
KVRAPDAVHNAGSADTHPLMESKLKAFSIGKMSAAKRTLSKKEQEELKKKEDEKAAAEIY
EEFLAAFEGSDGNKVKTFVRGGIVNASKEEHETDEKRGKIYKPSSRFSDQKNQPSQPSNE
KPPSLLMIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSD
SDGQRRSMDAPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRF
GPLASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVP
IPPHPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIV
KVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKL
YSILQGDAPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPNKKGALKEE
QRDKLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYL
VSDVLYNSSAKVANASYYRKFFETKLCQIFSDLNATYRTIQGHLQSENFKQRVMTCFRAW
EDWAIYPEPFLIKLQNIFLGLVNIMEDKETEEVPDDLDGAPIEEELDGAPLEDVDGIPID
AAPIDDLDGVPIKSLDDDLDGVPLDTAEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTS
KWELFDQHEESEEEEIPNQEEESEDEEDTQSSKSEEQHMYSNPIKEEMPESKSAVKYSEM
SEEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERE
RDKKDKEKSDSRSKDKKEKEECTPTRKERKRRHSASPSPSRSSGSRRAKSPSPKSERSER
SERSHKESSRSRSSHKDSPRDVSKKGKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRS
PHRSHKKSKKSKH
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcctggggagccatgggttccctgcagtgaaaatggagcgaggttgccggag
ccgtgtgacggaactgtactgccaggaaggtgttattgccgcagtgctgccctggcagag
actgaaaccactgaaaccagcttcattcccccgacaaggcccgacaatgctccgctgtgt
gcgcgcaccacaggccgctcgccccatcgctgtctcggcgctcggctgcccgtcctgagc
gggcggggccgttccgttgccatccgtggttcggcgctcgcttcatcgctgccggggctg
agcgaagggagaggcaagatggcggacaaggcgtcgggcggctcgcagaaaggcagcggg
aaggtcagagctcctgatgcggtacataacgctgggtctgctgatacacatcctttaatg
gaaagtaaacttaaagcattcagcattggcaaaatgagtgctgccaaaaggactttgagc
aagaaggaacaagaagaattaaaaaagaaggaggatgagaaggctgctgcagaaatttat
gaagaattccttgctgcctttgagggaagtgatggcaataaagtgaaaacatttgtaaga
ggaggaattgttaatgcatccaaagaggaacatgaaacagatgaaaaacggggtaaaatc
tataaaccttcatcacgattttcagatcaaaaaaaccagccaagtcaaccatctaatgag
aagcctccatccctcttaatgatagaaaccaaaaagcctcctttgaagaaaggagagaag
gaaaagaaaaagagcaatctggaactttttaaagaagaattaaagcagatacaagaagag
cgtgatgaaagacataaaacaaaaggtagattgagccgttttgagcccccccagtcggat
tcagatggtcagcgtcgttcaatggatgcgccttcaagaagaaacagatcatctggtgta
ctggatgattatgcaccagggtcacatgatgttggggatccaagcacaacaaatttgtac
ctgggaaacattaatcctcaaatgaatgaagagatgttatgtcaagaattcgggcgcttt
ggaccactagcgagtgttaaaattatgtggccaagaactgatgaagaaagagcaagagaa
agaaactgtggctttgttgcatttatgaacaggagagatgctgaaagagctttaaagaat
ttaaatggcaagatgattatgtcctttgaaatgaagctaggctggggcaaagctgtgcct
ataccaccacacccaatatacattccaccttcaatgatggagcataccctcccgcctcct
ccatcaggtctgccttttaatgcccagcctagggagaggttgaagaatcccaatgctcca
atgttacccccaccaaaaaacaaggaagattttgagaagactctgtcgcaagccatagtc
aaagtggttatcccaacagaaaggaatttgctcgcactgatacatcgaatgatagagttt
gtggtacgggaagggcctatgtttgaagccatgatcatgaaccgagaaatcaacaaccca
atgttcaggtttctgtttgaaaaccagactccagcccatgtgtattacagatggaagctt
tattcaattcttcagggagatgctccaaccaagtggaggacagaagatttccgtatgttc
aaaaatggatctttttggaggccaccaccattaaatccatacctacatgggatgtcagaa
gagcaagaaaccgaggcattcgtggaggaaccaaacaagaagggtgcacttaaggaggaa
cagagagacaagctggaggaaattttgcgtgggctaacgcctcgaaagaatgatattggt
gatgcgatggttttctgtctaaataacgcagaagctgctgaagaaattgtagactgcatt
acagaatcactgtccattctgaagactcctcttcccaagaagatcgcaaggttatatctg
gtgtcagatgtgttgtacaactcttcagctaaagttgccaatgcttcctactatagaaaa
ttttttgaaacaaaattatgtcagatattctctgatctcaatgctacttaccgtacaata
caaggccatttacagtctgaaaatttcaagcaaagggtaatgacatgcttccgagcatgg
gaagactgggctatctatccagaaccatttttgatcaagctacagaacattttcttgggg
cttgtaaatatcatggaagacaaagaaacagaggaagtaccagatgatcttgatggtgct
cccattgaggaagagcttgatggtgctccattagaagatgtggatggaattcctattgat
gctgctcctattgatgatctggatggagttcctattaaatcattggatgatgatcttgat
ggagtacctctggatacagctgaagactcaaaaaagaatgagcctatatttaaagttgct
ccttcaaagtgggaagcagtggatgaatcagaattggaagctcaagctgttaccacttct
aaatgggaactttttgaccaacatgaagaatctgaagaggaagaaataccaaatcaagag
gaggaaagtgaagatgaggaagacactcagagttcaaagtcagaagagcaacacatgtat
tccaatcctattaaagaagagatgcctgagtccaagtcagcagtcaaatactcagaaatg
agtgaagagaagcgtgccaaacttcgggagattgagctcaaggtgatgaagtttcaggat
gagttagagtctgggaaaagacccaagaaaccaggccagagttttcaggaacaggttgaa
cactatagagacaagctgctccagagggagaaagaaaaagagttggaaagagaacgagaa
agggacaagaaggacaaagagaagtctgattctaggtccaaagataagaaggaaaaggag
gaatgtacaccaacaagaaaagagaggaaaagaaggcacagtgcttcccccagcccatct
cgcagcagtggcagtagaagagcaaaatccccatcaccaaaatcagagcgctcggagcgc
tcagagcgatcccacaaagagagttcacgttctcggtcatcacataaagactctccaaga
gatgtcagtaaaaaaggcaaaaggtcaccatctggttccaggacacctaaaagatcaaga
agatcacgatcgaggtcccctaaaaagtcagggaaaaaatccaggtctcagtcccgttct
cctcacagatctcacaagaagtccaagaaaagcaaacactga
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