Coturnix japonica (Japanese quail): 107318115
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Entry
107318115 CDS
T04297
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cjo01002
]
107318115 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cjo04121
]
107318115 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjo04147
]
107318115 (USP13)
Enzymes [BR:
cjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107318115 (USP13)
Peptidases and inhibitors [BR:
cjo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107318115 (USP13)
Ubiquitin system [BR:
cjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107318115 (USP13)
Exosome [BR:
cjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107318115 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
107318115
NCBI-ProteinID:
XP_015727003
UniProt:
A0A8C2TV01
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All DBs
Position
9:complement(15301916..15341063)
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AA seq
862 aa
AA seq
DB search
MQRAALFGGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHIERHYRKTGQCVYLHLKRRVIEKVPGASGGALPKRRNAKLFLDLEANGD
LSGDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIASDALLSAKSPYRKQEPDSWEEE
LQASKHAKSLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGRGGNGHA
LEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPIDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQQNGIS
PQMFKAFISKDHTEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDCIMQLPVAMEAATNKDELIAYELKRREAEAARRPPPELVRAKIPFSACL
QAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPQYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDINHLRATGLQPGEEELPDIAPPIVIPEDPKDRMVNHFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVVPVFGGAASSGMAGLGAVGLD
NQPPEEMVSIIISMGFQRSLAIRALKATNNNLERALEWIFSHPELEEEDGEPALNMMDLE
NHTNANILAETRSEGPRIKDGPGRYELLGFISHMGTSTMSGHYVCHLKKEGRWVIYNDLK
VCASERPPKDLGYIYFYHRIPS
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctgttcggcggcggcgacgctcagatggcggccggggacctgggc
gagctgctggtcccctacatgcccaccatccgcgtgcccaagtccggggaccgggtctac
aagacggagtgcgccttctcctacgactctcccgattcagaaggaggtctctatgtgtgc
atgaacacgtttctgggatttggaagggaacacattgagaggcattaccggaaaacagga
cagtgtgtatatttgcatctgaaacgacgtgtgatagagaaggtaccaggggcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctagaggcaaatggtgat
ctgagcggtgatgactttgaatatgaagatgaagcaaaactcgttatatttcctgatcac
tatgaaatttcattaccaaacatagaagagttaccagcactggtgacaatagcttctgac
gcactcctcagtgcaaaatcaccctataggaagcaggaacctgactcctgggaagaagag
ctacaggcatctaagcatgccaaatctcttgtgcagttagacaacggcgttagaattcca
cccagtggttggaagtgctcaaaatgtgatcttcgggagaatctgtggctaaacctgaca
gatggttcagtgttgtgtgggaagtggttctttgatggtagaggagggaatggccacgca
ctggagcactacaaggagacgggttatcccctggcggtgaagttgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccggttttagatccacatatagca
aagcatctggcacactttgggattgatatgctgcagatgcaagtgacagagaacggtcta
agagataatgatataaaaccaagagtctctgaatgggaagtgattcaggaagctggcgtg
aaactcaagcccatgtatggcccaggatataccggcatgaagaacctggggaatagctgc
tacctcaatgctgtcatgcaggccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccgagaatatttgactactccccaattgatccaacacaagatttcaacact
cagatggctaaattgggacatggcctcctttcaggccagtattctaaaccacccatgaaa
tctgagcttattgaacaggtgatgaaagaagaacacaagcctcaacaaaatggaatatct
ccacagatgtttaaagcttttataagtaaagaccacacagaattttcctccaatagacaa
caagatgcacaggagtttttcctacatcttataaatctagtagagagaaatcctgtaggt
tcagaaaaccccagtgatgttttccgtttcctggtggaggagcgcacacagtgctgccag
tccagaaaagtacgctacactgagagggtggactgtatcatgcagttacctgttgccatg
gaggcagcaacaaacaaagatgaattaattgcatatgagctgaaaaggagagaagcagaa
gctgcaaggagacctccaccagaacttgtccgtgccaagatcccattcagtgcatgtttg
caggccttctctgaaccaagcaacgtagaggacttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagacttctcgttttgcttcatttcctcagtacttggtggtacagata
aagaagttcacctttggccttgactggatacccaaaaagcttgatgtttctatagacatg
ccagatttcctggatatcaaccaccttcgagccacgggtctccagccaggagaagaggaa
cttcccgacattgctcctcccattgtcattcccgaagacccaaaagatcgtatggtgaac
cattttgtggagtctctagatattgatgagtcctcggttatgcaactggcagagatgggt
tttcctttggaagcatgtcggaaagccgtgtactatacaggcaacctcggtgctgaagtg
gctttcaactggatcattgcacatatggaagagccagactttgctgagccattggttgta
cctgtgtttgggggagctgcttccagtggtatggctggcttaggggctgttggactggat
aatcaacctcctgaagagatggtctccatcatcatttccatgggcttccaaaggagcctt
gcaattcgagctctgaaggcaacaaacaataacttggagcgtgcactggaatggatcttc
agccaccctgaattagaggaggaagatggtgagcctgctttgaacatgatggatttggag
aaccatacgaatgcaaatatccttgcagagacaagatcagagggacccaggatcaaagat
gggcctggaaggtatgagctgcttgggttcatcagccacatgggcacttccacaatgagt
ggtcactacgtttgtcatctcaaaaaagaaggaagatgggtgatctacaacgaccttaaa
gtctgtgcctcagaacgacctcccaaagacctgggctacatttatttttaccacaggata
ccaagttag
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