Coturnix japonica (Japanese quail): 107321838
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Entry
107321838 CDS
T04297
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cjo03000
]
107321838 (RC3H2)
04121 Ubiquitin system [BR:
cjo04121
]
107321838 (RC3H2)
Transcription factors [BR:
cjo03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
107321838 (RC3H2)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107321838 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
107321838
NCBI-ProteinID:
XP_015734699
UniProt:
A0A8C2YAP6
LinkDB
All DBs
Position
17:complement(7241729..7270305)
Genome browser
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNVGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAASPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGSVISVI
GSPEATGKMVPSTNGIANLESGVPQLIPRCADTSLRALENSKKAGKSGANGQNVSGSPTE
SLPENKIGSPPKTPVSQAAATSAGPPNIGTEVNSVPPKSSQFVPRVPVYPPHSDNVQYFQ
DPRTQLSYEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKSGYDEQLRRKPEQW
AQYHTQKTPLVSSTLPMATPSPTPPSPLFSVDFNTEFSESVSDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNAVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDSA
SSARYAERDRFVVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLD
EGSRLTLNLLSKEIDLRNGETDYSEDCADTKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQDDQLLNGTTVENGHPLKQHQKESMEQKRQSLGEDLVILEEQKTILPVTSCFS
QPITTSVSNASCLPISTSVSVGSLILKTAHIMSEDKNDFLKPVANGRMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagaatttctgtcctgcccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagcttaggttgctctcacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgccatcaatacagac
atcgatgtgcttcctgtaaactttgcactcctccagttagttggagcccaggtacctgat
catcagacagtaaagttgagtaatgtaggagagaacaaacattatgaagtagcaaagaaa
tgtgttgaggatttggcgctctatttaaagccattaagtggaggaaaaggtgttgctagc
ttgaatcagagtgcactgagccgtccaatgcaaaggaagcttgtgacactggtgaattgt
cagctggtagaggaagagggtcgagttagagctatgagagcagctcgatcactgggcgag
agaaccgttacagaattgatcttgcagcaccaaaatcctcagcagctttctgccaatctt
tgggctgctgtcagggcacgaggatgtcagtttctaggaccagctatgcaagaggaggca
ctgaaacttgtattactggcactggaagatggctccgcactctcaagaaaagttctggta
ctttttgtggtgcaaaggctagaaccaagatttcctcaggcctctaaaacaagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcactaaaagggatgaagat
tcttctctgatgcaacttaaagaagagtttcggagttacgaggctttgcggagagaacat
gatgcccaaattgttcacattgccatggaagcaggacttcgaatatcaccagaacagtgg
tcttcccttctttatggtgacctggcacataaatctcacatgcaatccattattgacaag
ctccaatctccagagtcttttgcaaagagcgtgcaagaactgacgatcgtcttgcagcgc
acaggtgatcctgcaaacttaaacaggctgagacctcatttagagcttctggcaaacatt
gacccaaatccagatgcagcatctccaacatgggagcagctggaaaatgcaatggtggct
gtaaagacggtggtacatgggctggtggatttcattcagaattacagtagaaaaggccat
gaaactccacagccacaaccaaatagcaaatacaaaacaagtatgtgccgagaccttcga
cagcaaggtggatgtccaagaggaaccaactgtacgtttgctcattctcaggaagagctt
gaaaaatatcgcttgaggaacaaaaaaatcagtgcaacagtgagaacattcccccttcta
aataaagttggtgttaatagcaccgtctcaaccactacaggaagcgtaatttctgtcata
ggaagccctgaagcaacagggaagatggtgccaagtactaatggaatagctaatctagaa
agtggtgttccccaattgatccctcgctgtgcagacacttccttaagagctttggagaac
tccaagaaggcagggaagagcggagccaatggacagaatgtttctggatcccctacagaa
tcactacctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtccccctaatattggaacagaagtgaattctgtgcctccaaagtccagc
caatttgttcccagagtacctgtttaccctccacattctgataatgttcagtatttccaa
gatcccagaactcagctgtcgtatgaagttccacagtacccacagacaggatactatcca
ccacctccaacagtaccagctggcgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtacg
tttccacctcgagatcgactgagttctccttaccaacctcctcctcctcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgctccggtttatgacagcaggcgcatctgg
cgcccacagatgtacccacgggatgatattatcaggagcaattctttacctcctatggat
gtgatgcactcatctgtctatcagacatcattacgtgagagatacaactctttggatggg
tactactctgtggcttgtcaacctccaaatgagcagaggactgtgcctttaccaagggag
ccttgtggtcacttgaagtctgggtatgatgaacaattacgacggaagccagaacaatgg
gctcagtatcacacgcagaaaactcctcttgtatcatcaacccttcctatggcaacacca
tctccaacgccaccttctcctctcttcagcgtagatttcaatacagagttctctgagagt
gtcagtgatttgagtggaactaaatttgaggaagatcatctctctcactattcaccatgg
tcttgcggcactattggctcttgtataaatgctatcgactcagagcccaaggatgtgatt
gccaattcaaatgctgtgttaatggatttggacagcggggatgttaaaaggagagtgcat
ttatttgaaactcagagaagggcaaaggaagaggatcctataatcccatttagtgatgga
ccgatcatttccaagtggggtgcaatctccaggtcatcccgcacgggttatcacacaaca
gatccaattcaggccactgcttcccaaggaagtgcaactaagcccatcagtgtatcagat
tatgttccttacgttaatgctgttgactcaagatggagttcttatggctcagattcagct
tcatcagcacgttatgcagaacgggacagatttgtagttacagatttgtctggtcacaga
aagcattccagcactggagatctattaagtattgaattacagcaggccaaaagtaactca
ttattacttcagagagaggcaaatgcactagccatgcaacagaagtggaattctctagat
gaaggcagtcgacttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
actgattatagtgaagactgtgccgatacaaagccagatcgagacattgaattggagcta
tctgcccttgatacagatgaacctgatgggcagggtgaacaaatagaagagatcctggat
atacagctaggtatcagttctcaagatgatcagctgctcaatggaacaactgtagagaat
ggtcatccactaaagcagcaccagaaagaatctatggaacagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaaacaatcctgcccgtaacttcttgcttcagt
cagccgatcacaacatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaatgacttttta
aagcctgttgcaaatggcaggatggttaacagctga
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integrated database retrieval system
