Coturnix japonica (Japanese quail): 107322608
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Entry
107322608 CDS
T04297
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like isoform X2
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjo03016
]
107322608
Enzymes [BR:
cjo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
107322608
Transfer RNA biogenesis [BR:
cjo03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107322608
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Flavodoxin_1
Radical_SAM
Flavodoxin_NdrI
Hydrolase
DUF3280
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
107322608
NCBI-ProteinID:
XP_015736288
UniProt:
A0A8C2SW61
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Position
19:561946..606028
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AA seq
741 aa
AA seq
DB search
MAGGLDVSMDTWSFLYTCLVSLWLHRFYIYSVTAFGISLWIAIQFFTTKARRKDENSNGN
LSSSQLVEDKAVNGYAALQTKEVYVAGVKIFYGSQTGTAKRFAEDLAEAVTCFNLPVEVI
SMGDYDPDDCLAEETTSRNICVFLVATYTDGQPTESAAWFCKWLEETSNDFRFGKTYLKG
LRYAVFGLGNSVYVDHYNMVGRNIDRWLWMLSARRIMTRAEGDCNVVQSKHGSIEADFDA
WKTKFLSRLQALCRGEKKPCSGKCKKGKCKSQGKQSKESSNNERGAPEFENAEAEELFET
TSEEEADAEEAGGTDSVVDVEDLGKIMNHMKKAKRERELEDGDAGTSLLGETSGRKEAGE
RREMITAALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEAT
PSLACANKCVFCWRHHTNPVGTEWRWKMDQPEMILREALENHRNMIKEFKGVTGVRAERL
EEAMTAKHCALSLVGEPIMYPDINRFLRLLHQRGISSFLVTNAQFPEEIRNLEPVTQLYV
SVDASTKESLKRIDRPLFKDFWQRFLDSLKALSEKQQRTVYRLTLVKAWNVDELKAYADL
VSLGKPDFIEVKGVTYCGDSSASSLTMANVPWHEEVVRFVQELAQLLPDYGIACEHEHSN
CLLIAHKKFKINGDWYTWIDYERFQELVRAHVDSGGTKTFTATDYTARTPHWALFGSNQR
GFDPLDVRYQRRGKVRDVSGC
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggtttagatgtctcaatggatacgtggagctttctctacacttgcctggtg
tccttatggctgcacaggttttacatctattctgttactgcttttgggatcagcctttgg
attgctattcagttcttcactaccaaagccaggaggaaggatgaaaattccaatgggaat
ctatcatcttctcagctagtagaagacaaagcagtcaatggatatgctgctctgcagaca
aaggaggtctatgtcgctggggtgaagattttctatgggtctcagactggcacagcaaag
agatttgcagaggatttggctgaagctgttacttgctttaatttgcccgtggaagtcatt
agcatgggagactatgatcctgatgattgtctagcagaagagacaaccagcaggaacatc
tgtgtgttcctggtggctacgtacacagatgggcagccaactgagagcgcagcctggttc
tgcaagtggttggaagagacttcaaatgactttcgctttggcaaaacgtatttgaagggc
ctgagatacgctgtgtttggcttgggaaactcagtttatgttgatcattacaacatggtt
ggaagaaacattgacaggtggctgtggatgctcagtgccaggcgtatcatgactcgtgct
gagggggactgcaatgtggtacagagcaagcatggcagcattgaggctgactttgatgcc
tggaaaaccaaattcctcagtcgtctccaggccctctgcagaggggaaaagaagccctgc
agtgggaagtgcaagaaggggaagtgcaaatcccaagggaagcagagtaaggagagttca
aataatgaacgtggagcaccagagtttgagaacgctgaggctgaagaattgtttgaaacc
accagtgaggaggaagctgatgctgaggaagctggaggcacagattctgttgttgatgtt
gaagatctcggcaaaatcatgaaccacatgaagaaagccaagagagaacgtgaactggag
gatggagatgctggaacgagtttgcttggagagacgtctgggaggaaggaggccggtgaa
aggagagaaatgataactgcagccctgagggatgcactcacaaaacaaggctataagctg
ataggaagccactccggagtgaagctctgtcggtggacaaagtcgatgctccgaggcaga
ggcggctgctacaagcacacgttctatggaatcgagagccatcgctgcatggaggccaca
ccgagcctggcctgtgccaacaaatgtgtgttctgctggagacatcacacaaaccccgtg
ggcacggagtggaggtggaaaatggaccaacctgaaatgatcttgagggaagctcttgag
aatcatcggaacatgatcaaggagttcaaaggagtgacaggagtgagggcagagcgcttg
gaggaggcgatgacagcgaagcactgtgctctgtccctggtgggagagcccatcatgtac
cccgacatcaaccgcttcctgcggctcctgcaccagcgtggcatctccagcttcctggta
accaacgcacagttcccagaggagatcaggaacttggagcccgtcactcagctgtacgtc
agcgtggatgccagcaccaaggagagcctgaagagaatcgatagacccctcttcaaagat
ttctggcagaggttcctggacagcttaaaggccttgtctgaaaagcaacagcgcacagtc
tataggctgacattggtgaaagcttggaacgtggatgagctcaaagcctatgctgacctg
gtgtcccttggaaaaccagacttcatcgaggtcaagggggtgacgtactgcggtgacagc
tcggccagcagcctcaccatggccaacgtcccctggcacgaggaggtcgtgcgcttcgtc
caggagctggcccagctcctcccagactacggcatcgcctgcgagcacgagcactccaac
tgcctcctgatagctcacaagaagttcaagatcaacggtgactggtacacgtggatcgac
tacgagcgcttccaggagctggtgagggcacacgtggacagtgggggcacaaagaccttc
acagccacagactacacagccaggactccacactgggctctctttgggtccaaccaacgt
ggcttcgatcccttggacgtgagataccagcggagaggcaaagtgagagatgtctctggg
tgctga
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