Coturnix japonica (Japanese quail): 107322797
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Entry
107322797 CDS
T04297
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03250
Viral life cycle - HIV-1
cjo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
107322797 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107322797 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107322797 (SAMHD1)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
107322797 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
107322797
NCBI-ProteinID:
XP_015736712
UniProt:
A0A8C2UCC3
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Position
20:complement(519323..545939)
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AA seq
613 aa
AA seq
DB search
MCSAAKRWDAAPAKRARREGFAGNSRGSAADGDPRLWDSERLCRHLASSGVCEPGLLHRF
RESGVTGAMLLDLPACALQITRTCLPEERLKVLACLNQLRQTVDIMKVFNDPVHGHIEIH
PLLVRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVRELKERQPEL
DITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLAREGLKWKHETASVEMFAHLIASNK
LEEVMESYGLILEEDMVFIKEQIGGPIDETACEESWPYRGRPKEKSFLYEIVANKKNGID
VDKWDYFARDCHHLGIQNNFDYRRFIKFTRVCEAGNQKHICTRDKEVGNLYDMFHTRNCL
HRRAYQHKVGNIIEIMITEAFQKADRFFQIEGSKGKLYRISTAMEDMEAYTKLTDNIYLE
ILHSSRPELREAREILHKIERRELYKFLGETQPEEQCEIPKDEYDGLAGDIANSKPEKDP
PNVELKAEDFIVDVVNMDYGMKDQNPIDNVLFYCKADPSKAIKISKEQVSRLLPGTFSEQ
VIRVYCKSQDPVIVSAAKQYFVQWCIKRNFTKPQDGDVVAPHLTPLKQSWNNRSRDECKT
ASEPSCKQKLSFN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagcgcggccaagcgctgggacgcggctcccgccaagcgcgcgcggcgcgaaggc
ttcgccgggaattcccgcggctccgcggccgacggcgacccgcggctgtgggacagcgag
cggctctgccggcacctcgcgagcagcggcgtgtgcgagcccggcctgctgcaccgcttc
agagagagcggcgtcaccggggccatgctgctcgacctgcccgcctgcgcgctgcagatc
acccgcacctgccttccagaggagagactgaaagtgctcgcctgcctgaaccagctgaga
cagacagtggacatcatgaaggtttttaatgatccagttcatgggcacattgagatacac
cctcttcttgttcgcatcattgacacacctcaatttcagcgcctgcgatacattaagcag
ctgggtggcacctactttgtttttccaggagcctctcacaaccgctttgaacactcatta
ggggtgggctaccttgcaggatgtctggttcgtgaactgaaggagcggcaaccagaactg
gatataacccagcgagacatcctctgtgtggagattgctgggctttgtcatgatttgggt
catgggccattttcacacatgtttgatggaagatttattcctcttgctcgtgaaggtttg
aagtggaagcatgaaactgcttctgttgaaatgtttgcgcacctgattgcatccaataaa
ctggaagaagtcatggaatcgtacggtctcatcctggaggaagacatggtcttcattaag
gagcagataggagggcctatagatgagacagcttgtgaggaatcgtggccctaccgagga
cgaccaaaggagaagagtttcctatacgagatagtggcaaacaagaaaaacggcatcgat
gtggacaaatgggattattttgcaagggattgccaccatctagggatccagaataatttt
gattataggcgctttattaaattcactcgtgtttgcgaagcaggaaaccagaagcatatc
tgtacccgtgataaggaagttggaaatttatatgatatgttccacactcggaattgcctg
caccgacgagcctaccagcataaggttggcaacatcattgaaataatgattacagaagcc
tttcaaaaagcagaccgtttttttcagatagaaggctctaaggggaaattgtaccggatc
tctacagcgatggaggacatggaagcctacactaagctaactgataatatctacctggaa
attctgcactcaagtcgtccagaactgagagaggcacgagaaatcttgcataagatagaa
cggcgtgaattgtacaagtttttaggagagactcaacccgaagaacagtgtgaaattcca
aaggatgaatacgatggcctggcaggtgacattgctaactccaagccagaaaaggatcct
ccaaatgtggagctgaaggctgaagacttcatagttgatgttgttaatatggattatgga
atgaaagatcagaaccccatcgataatgttctcttctactgcaaggctgatccttccaag
gccatcaagatcagtaaagaacaggtttcaaggcttttacccgggaccttttcagagcag
gttatccgggtttactgcaagagtcaggatccagtcattgtttctgctgcaaagcagtat
tttgttcagtggtgcattaagaggaatttcaccaaaccacaggatggtgatgtggttgcc
cctcatctaactccactgaaacaaagctggaataacagaagcagggatgaatgcaagaca
gcttctgaacccagctgcaagcagaagctttccttcaattag
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