Caldicellulosiruptor kronotskyensis: Calkro_0864
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Entry
Calkro_0864 CDS
T01357
Name
(GenBank) type 3a cellulose-binding domain protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ckn
Caldicellulosiruptor kronotskyensis
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Calkro_0864
Enzymes [BR:
ckn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
Calkro_0864
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
CBM_3
FG-GAP_3
FG-GAP
Arch_flagellin
Motif
Other DBs
NCBI-ProteinID:
ADQ45740
UniProt:
E4SDD1
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Position
1036170..1038701
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AA seq
843 aa
AA seq
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MLTNKKLREYVYFVSIIFFMTIILLNGQINVSKSNLALAATGSQIEKLNRGLIAIKVTNG
VFLSWRMFGSDLANIGFNIYRNGVKITNTPIQNSTNYVDTAGTAASKYYVKAVINGVEVE
QSEEVSVLSSNYIEIRLNKPANSPLGASYSPNDASVGDLDGDGEYEIVLKWDPSDSKDNS
QSGYTSNVYLDAYKLNGKFLWRIDLGRNIRAGAHYTQFIVYDLDGDGKAEVACKTADGTI
DGQGNVIGDPNADWRNSSGYILSGPEYLTIFEGATGRAIKTVNYIPPRGNVSSWGDSYGN
RVDRFLAAVAYLDGNRPSLIMCRGYYTKTYIVAWNWRNGELTKLWQFDTGEIRDGYRDDY
EGQGNHNLSVADVDNDGKDEIIYGAMVVDDNGAPLYSTKLGHGDAMHVTDIDPDRPGLEV
WQCHEGSTGASLRDARTGQILVRVLTSGDCGRALTADINPRYRGLEMWAAGGISVRDCRG
NVISNATPPINFAIWWDGDLGRELLDNIYIYKWDYNNNRSNTIFTASGCSSNNGTKATPC
LCADILGDWREEVIFRTSDNNAIRIYTTTTLTDYKIPTLMHNRQYRVSIAWQNVAYNQPP
HVSFYLGYETNVNNIYQYFEGYGQQPIATPSLTPMKTPTPTSTPLPTSTATSTPIPTATP
TPTPTPRPTSTPTPTPTATPTPTPSSTPVAGGQIKVLYANKETNSTTNTIRPWLKVVNTG
SSSIDLSRVTIRYWYTVDGERAQSAISDWAQIGASNVTFKFVKLSSSVSGADYYLEIGFK
SGAGQLQAGKDTGEIQIRFNKSDWSNYNQGNDWSWMQSMTNYGENTKVTAYIDGVLVWGQ
APK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgttaactaataaaaagcttagggagtatgtatattttgtatcgattatttttttcatg
actattatattgttaaatggacagataaatgtgagcaaaagtaatttagcattggcggca
acaggaagtcaaattgagaagttaaatagaggattaattgcaataaaggtaaccaacgga
gtatttttgagttggagaatgtttggttcagatctagcgaatatagggtttaatatttac
agaaatggagttaagataactaatacgccgattcagaacagcacaaactatgttgatact
gctgggacagctgcttcgaagtattatgtaaaagcagtgataaatggtgtagaggtagag
caatctgaagaagtaagtgtgcttagtagcaattatatagaaataagattaaataaacca
gcaaattctccactcggtgcttcatattcgccaaatgatgcaagtgtcggcgatttagat
ggtgatggggaatatgagattgttctgaaatgggatccaagtgattcaaaggataactca
caatctggatacacaagcaatgtgtatttagacgcttacaaattaaatggcaagttctta
tggagaattgatttgggtaggaatataagagcaggagcacattatacacaatttatagta
tatgatttagatggtgacggaaaagctgaagttgcatgtaaaacagctgatggaacaata
gatggacaagggaatgtgataggtgatccaaatgctgattggaggaattcctctggttat
attttatcagggcctgaatatttgactatatttgaaggtgcgacaggacgagcaataaag
acggttaattatattccgccacgtgggaatgtttcatcatggggtgattcttatggaaac
agggttgacaggtttttagcagcagtagcttatttggatgggaatagacctagcctaatt
atgtgccgaggatattacacaaaaacatatatagttgcttggaattggcgaaatggtgag
ttaacgaagttatggcaatttgacacaggagagattagagatggatatagagatgattac
gaaggacaaggaaatcacaatttgagtgtggctgatgttgacaatgatggtaaggatgag
ataatatatggtgctatggtagtagatgataatggagcaccattatattcaactaaatta
ggtcatggtgatgcaatgcatgtgacagatattgatccagacaggccaggattagaagtt
tggcagtgtcatgaaggaagtacaggagcgagtttaagggatgcacgaactggacagata
ttagtgagagttttaacatctggagattgtggacgtgctttgacggcagatattaacccg
cgatatagaggattagaaatgtgggcggcaggtgggataagtgttagagattgtagaggt
aatgtaatcagtaatgcgacaccaccaattaattttgcaatatggtgggatggagattta
ggtagagaattgttggataatatatatatttataaatgggattataacaataataggagt
aatactatatttacagcaagtggatgttcatcaaacaatggcacaaaagcaacaccttgc
ttgtgtgcagatatacttggggattggcgagaagaggttatatttaggactagtgataac
aatgcaatcaggatatatacaaccaccacattgacagattataagatacctacgcttatg
cataacaggcaatatagggtgtctatagcatggcagaacgttgcatataatcaaccacct
cacgtaagtttttatttagggtatgagactaatgtgaataacatatatcaatattttgaa
ggttatgggcaacaaccaattgctacaccgtcgctaaccccgatgaaaacaccaacgcct
acatcaactccattgccaacatcaactgcaacatctacgccaattccaacagcaacacca
actccaaccccgacaccaagaccaacgtcaacaccaacaccgaccccaactgctacccca
acaccgacgccgagcagcacacctgtagcaggtgggcagataaaggtattgtatgcaaac
aaggagacaaatagcacaactaatacgataaggccatggttgaaggtagtgaacactgga
agcagcagcatagatttgagcagagtaacgataaggtactggtacacggtagatggagag
agggcacagagtgcgatatcagactgggcccagataggagcaagcaatgtgacattcaag
tttgtgaagctgagcagtagcgtaagtggagcggactattatttagagataggatttaag
agtggagctgggcagttgcaggctggtaaagacacaggggagatacagataaggtttaac
aagagtgattggagcaattacaatcaggggaatgactggtcatggatgcagagcatgacg
aattatggagagaatacgaaggtaactgcgtatatagatggagtattggtatgggggcaa
gcaccaaaataa
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