Corynebacterium kroppenstedtii: ckrop_1286
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Entry
ckrop_1286 CDS
T00896
Name
(GenBank) Transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
ckp
Corynebacterium kroppenstedtii
Pathway
ckp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ckrop_1286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckp03021
]
ckrop_1286
03019 Messenger RNA biogenesis [BR:
ckp03019
]
ckrop_1286
Transcription machinery [BR:
ckp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ckrop_1286
Messenger RNA biogenesis [BR:
ckp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ckrop_1286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
ACR18031
UniProt:
C4LJM6
LinkDB
All DBs
Position
complement(1529738..1531759)
Genome browser
AA seq
673 aa
AA seq
DB search
MTDTDTNNLAAMRIPELKALAAEKGIRGLSGLRKGDIIAAIQAADAGQPYSRPRRSTRKA
GEPKAESHHSDNSESPNADSFNAGSSANNDGHGSGSDNRHNGNDDRREDEHSGGSGSHSD
SGSDNDNGRDDDSDDSRHHGYKSRSQARRARRHRARHNGHSNDGDDRNNSSRDSSDDSDD
NNSRRDDDRNNNNDHRRSNDDRDDRYSHNDDNSGDNNDHNGRGGRNNQDHRGGRNNRNDR
DNRNDRGGRNNRNDRNNRGNRRNRRNRDNRDNQNPNQLREGETFQPIAGILDVVDNNTAF
IRTSGYQSGPNDVYVSMNMVRSQGMRRGDAVTGQIKVREDGSSRPQHGRGRNRQKFAPLA
RVDTVNGMTPEEAKARPEFAKLTPLYPNQRLRLETDQKKLTTRVIDLIMPIGKGQRALIV
SPPKAGKTTILQDVANAITTNNQECYLMVVLVDERPEEVTDMQRSVNGEVIASTFDRPPS
EHTTVAELAIERAKRLVEAGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPP
KRFLGAARNIENGGSLTIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPA
VDVNPSGTRKDELLLAPDEARVMHKLRRILSALDPQQAIDLLIKQLRKTKNNGEFLMQIA
SSAPMSVPDDDDD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacacgaacaacctggccgctatgcgcatcccggaattaaaggcgcta
gctgccgaaaaggggattcgaggactctcagggctgcgcaagggggatatcatcgcagcc
attcaggccgccgacgctggtcagccgtattctcggcctcgtcgatccacgcggaaagcg
ggggaaccgaaggccgagtcccaccattcggataactctgaatcgccgaacgccgattca
tttaacgctggatcgtcggcaaacaacgacggacacggttctggctccgataaccggcac
aacggcaacgacgaccgtcgtgaggatgagcactctggtggctccggctcccactccgac
tccggctcggataatgacaacggccgcgacgacgattctgacgattcccgccaccacggc
tacaaatcgcgctcccaggcacgtcgcgcacgtcgtcaccgtgcccggcacaacggtcat
tccaatgacggtgatgaccggaacaattcgtcccgcgattcttccgacgattcggatgac
aacaactcccgccgggatgatgatcggaacaacaataatgatcatcgacggtccaatgac
gaccgtgatgaccgttatagccacaatgacgacaactccggtgacaacaacgaccacaat
ggtcgcggtggccgtaataaccaggaccatcgaggcggccgcaacaaccgcaatgaccgc
gacaaccggaacgatcgcggaggtcgcaataaccgcaacgaccgtaataaccgcggtaat
cggcgcaaccgccgcaaccgggataatcgcgacaaccagaacccgaaccagctgcgcgaa
ggtgaaaccttccagccgatcgcgggcatcctcgatgttgtcgacaacaacaccgcgttc
attcgcacgtcggggtaccagtccggcccgaatgatgtgtatgtgtccatgaacatggtt
cggtcccagggcatgcgtcgtggcgacgctgtgaccgggcagatcaaggtccgtgaggac
ggttccagccgcccacagcatggtcgcggccgcaaccggcagaagttcgcccccttggcg
cgcgttgacacggtcaacggcatgacgccggaggaggccaaggcccgccccgagttcgcc
aagctcacaccgctctacccgaaccagcggctgcggctggagacggaccagaagaagctc
acgacgcgtgtgattgacctcatcatgccgatcggtaagggacagcgtgcgctgatcgtg
tccccgccgaaggccggtaaaacgacgattctgcaggacgtcgctaacgccatcacgacc
aacaatcaagagtgctatctcatggttgttcttgtcgacgagcgccctgaggaagtcacc
gatatgcagcgctcggtcaatggcgaagtgatcgcctcgacgtttgaccgtccgccgagc
gagcacaccaccgtcgctgagctagccattgagcgggctaagcgccttgttgaggctggt
caggacgtcgttgtgctgctggattccatcacgcgactgggccgtgcgtacaacaactcg
tccccggcgtcgggacggatcctgtctggtggtgtggattccaacgccctctacccgccg
aagcgattcctgggcgcagcccgcaacatcgaaaacggtggttcgctgaccattatcgcg
acggcgatggtcgagactggttccgccggcgacaccgtcatcttcgaggaattcaagggc
acgggtaacgcagagctgaagcttgaccggaagatttcggagcgccgcgtcttcccagct
gtcgacgtgaatccgtcgggtactcgtaaggatgagctgctcttggctcccgacgaggca
cgcgtcatgcacaagctgcgtcggatcttgtcggcactggacccgcagcaggccattgac
ttgcttatcaagcagctgcgcaagaccaagaacaatggcgaattcctcatgcagatcgca
tcgtcggcacccatgagtgttcccgacgatgatgacgactaa
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