Clostridium kluyveri NBRC 12016: CKR_0628
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Entry
CKR_0628 CDS
T00832
Name
(GenBank) hypothetical protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ckr
Clostridium kluyveri NBRC 12016
Brite
KEGG Orthology (KO) [BR:
ckr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckr03400
]
CKR_0628
Enzymes [BR:
ckr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKR_0628
DNA repair and recombination proteins [BR:
ckr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CKR_0628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_11
AAA_30
DUF3638
Motif
Other DBs
NCBI-ProteinID:
BAH05679
UniProt:
B9DZK4
LinkDB
All DBs
Position
693187..696903
Genome browser
AA seq
1238 aa
AA seq
DB search
MINVNTKWTETQKSAIFTPNCNLLVAAGAGTGKTAVLVERILQKVINDSEEVDIDKLLVV
TFTNAAASEMKERVGEALSKLLELNCTSKNLQRQLALLNQSNIMTIHSFCLKVIKNNFHR
IDLDPNFRICDDTESKLLKQDALLELFEEKYEEENLGFLNLADGYGGKNDSKLQDIVLSL
YEFSQGSPWPKRWLQDVLKDFNLGSDFDFGDTKWAKVLMHNVTVELKGCKNKMKNILNTI
ENIEGLEHYLEPFKSDIESIDKLINITTWDEIRDEFIKLSFNKLPSKRTDPLVKSYKDKA
RNTRDEVKKKLISIREDIILCTDDIYENFKEVYPLMKSLTFLVMDFYEKYHNKKSERNMI
DFNDIEHFCLEILTSKDKNGDIIPSEAALEYREYFEEIFIDEYQDSNEVQEVIMNMISRK
NIYANLFMVGDVKQSIYRFRQARPELFLEKYNSYDEKEGSKNRKIKLSENFRSRKEIIDA
INYIFKQIMCREVGELDYGEEECLKSSARYEPFEGNCGGDVELHVVDKKENENKLEDENE
EELLDAISVEARLVASKINELVNPSLDQYSFKVYDKEIDNYRSIMYKDIVILMRATQNWA
PAFVEELNNSGIPVFADTSVGYFQAIEIKTIISLLQIIDNPLQDIPFIALLRSPIGGFSP
EDLIDLRVVNREISFYEILKAIKEHSLELKYSLEHIDERLEYKVEQFFNKLCLWRRKVIH
MPIDEFIWHIYIETGYYGFVGAMPGGIQRQANLRMLFERAKQYKNISYKGLFNFINFINK
LKSSSTDMGNAKILGENENVVRIMSIHKSKGLEFPVIILSGAGKRFNLTDINKSVLFHKE
LGLGPEYVNSERHISYPTIVKQVLKRKLKMETLSEEMRILYVAFTRAKEKLIITGTVDNI
ENTFQRWCEAAYCEEDKLPEYSLINSRNFLDWIGPAVARHPCGEIIRKVCPFEYNLNLIT
GDDSKWKVFVYSKDNFKSTLDENIDEDIIGKIKSLELDNNKEIYKNEVYRRLNWTYKYEQ
SSKIAAKFSVSELKRRFKLIDTENGIEFMEPIYLKKPAFLRESKGLTPSERGIVMHLVMQ
HIDIDKVGSYEQIKEQVDKLVFREFITEAEAKSISVYKIIKFFNSEIGIRMKKSNNVYRE
VPFYMEIESTELYKQLPQHIYRDEKVLIQGIIDCYFEENNELILVDYKTDHVGDIDSIKE
KYQVQIYYYGRALEKLTGKKVKKKYLYLFSKDYILDLS
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
gtgataaatgtgaatacaaagtggacggaaactcaaaaaagtgccatatttactccaaat
tgcaacttattggtggcagcgggagcgggaactggtaaaactgcagtattggtagagaga
atactacagaaagtaataaatgatagtgaagaagttgatatagataaattattagtggtt
acatttacaaatgcagcagcttctgagatgaaggagagagtgggagaggcactttctaag
ctgcttgagttaaattgtacttctaaaaatcttcaaagacaacttgccttattaaaccaa
tccaacataatgacaatacattctttttgtcttaaggttataaagaataattttcataga
atagatttagatcctaattttagaatatgtgatgacacagaatctaagttattaaagcag
gatgcccttttagaactttttgaggaaaagtatgaagaagaaaatttgggatttttaaat
ttggcagatggatatgggggaaaaaatgatagtaaacttcaagacattgtactttcccta
tatgaattttctcagggcagtccatggcctaaaagatggcttcaggatgtcttaaaagac
ttcaatttaggcagtgattttgattttggagatactaagtgggccaaggtattgatgcac
aatgtaactgtggagcttaagggctgtaaaaataagatgaaaaatatactgaatacaatt
gagaatatagagggattagaacattatctggaaccctttaaaagtgatattgaaagtata
gataaacttataaatattaccacctgggatgaaataagagatgaatttattaagttaagt
tttaataaacttccctctaaaagaacagatcctctggttaaatcctataaagataaagcc
agaaatacaagagatgaagtaaaaaagaaattaattagtataagagaagatataatttta
tgcacagatgatatatatgaaaatttcaaagaagtatatcctttaatgaaatctttaact
tttcttgttatggacttctatgaaaaataccataataaaaaaagtgaaagaaatatgata
gattttaatgatatagaacatttctgccttgaaatattaaccagtaaagataaaaatgga
gatataatcccctcggaagcggctttagaatacagagaatactttgaagaaatatttata
gatgagtatcaagacagtaatgaagtccaagaagttataatgaatatgataagtagaaaa
aatatttatgctaatttatttatggtaggagatgtaaagcagagtatatatagatttaga
caggcaagaccagaattattcttagaaaaatataatagctatgatgaaaaagagggtagt
aaaaataggaaaatcaagttgtctgaaaattttagaagcagaaaagaaataatagatgct
ataaattatatatttaaacaaataatgtgtagggaagttggagaacttgactatggtgag
gaagaatgtttaaagagttccgcacgatatgaaccttttgaaggaaattgtggtggagat
gtagaacttcatgtggtagataaaaaggaaaatgaaaataaattagaagatgaaaatgag
gaagagttattagatgctatttctgtggaagcacggttggtggcatcaaagataaatgaa
ttagtaaatccctcattggatcagtatagttttaaagtatatgataaggaaattgataac
tatagatctataatgtataaagatatagtgatattgatgcgtgctacgcaaaattgggca
cctgcatttgtggaggaactaaataattcaggaatacctgtatttgctgatacttctgtg
gggtattttcaggctattgaaataaaaactataatatctcttcttcaaataatagataat
ccgcttcaagatattccctttatagcattactccgctctcctataggaggattttctcca
gaggatcttatagatttaagagtagttaatagggaaatatctttttacgaaatactaaaa
gctataaaggagcatagtctggagttaaaatactctttagaacatatagatgaaagattg
gaatataaggtggaacaattttttaataaactttgtctctggaggagaaaagttatacat
atgcccatagatgaatttatatggcatatttatatagaaacaggatattatggttttgta
ggtgctatgcctggaggtattcaaagacaggcaaatttaagaatgttatttgaaagagct
aaacagtataaaaacattagttataaggggctttttaattttataaattttataaataaa
cttaaaagcagcagtactgatatgggaaatgccaagatacttggagaaaatgagaatgta
gtcagaataatgagtatacataagagtaaaggattggagtttcctgtaataatactttct
ggagcaggaaagagattcaatttgacagatataaataaaagtgtattatttcacaaagaa
ctaggacttggaccagagtatgtaaattctgaaagacatatttcctatcctaccattgtt
aagcaggtattaaaaagaaaattaaagatggaaactctttcagaggagatgagaatactt
tatgtagcttttaccagagctaaagaaaaacttataataacagggacagtagataatatt
gaaaatacttttcaaagatggtgtgaagcagcttattgtgaagaagataaacttcctgaa
tattcacttataaattctaggaattttttggattggataggacctgcagtggcaaggcat
ccttgtggagaaattattagaaaagtgtgtccttttgaatataatttaaatcttataaca
ggagatgattctaaatggaaagtatttgtatacagtaaagataattttaaaagtacattg
gatgagaatatagatgaagatataataggaaagattaaaagtttagagttagataataat
aaagaaatatacaaaaatgaagtgtatagaagacttaattggacttataaatatgaacaa
tcttctaaaatagctgctaaattttcagtatctgagttaaagagaagatttaagttaata
gatacagaaaatggtatagaatttatggaaccaatatacttaaaaaaaccggctttttta
agggaaagtaaaggactcactccttctgagagaggaattgttatgcaccttgttatgcag
cacattgatattgacaaagttggttcttatgaacagataaaagagcaagtagataaattg
gtatttagagaatttataactgaagcagaagccaagtccatatcagtatataaaataata
aagttttttaattctgaaattggaataagaatgaaaaagtcaaataatgtatacagggaa
gttccattttatatggaaatagaaagtacagaattatataaacagctgccacagcacata
tatagagatgaaaaagtattaattcagggaataatagattgttattttgaagaaaacaat
gaattaatactcgtagattataaaactgatcacgtaggagatatagattcaattaaagaa
aaatatcaagttcaaatttattattatggaagggcattagaaaaattaacaggtaagaaa
gttaaaaagaaatatttgtatttattttctaaagactatatactggatttatcttaa
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