Corynebacterium kutscheri: UL82_03980
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Entry
UL82_03980 CDS
T03866
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
cku
Corynebacterium kutscheri
Pathway
cku03030
DNA replication
cku03410
Base excision repair
cku03420
Nucleotide excision repair
cku03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cku00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UL82_03980 (ligA)
03410 Base excision repair
UL82_03980 (ligA)
03420 Nucleotide excision repair
UL82_03980 (ligA)
03430 Mismatch repair
UL82_03980 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cku03032
]
UL82_03980 (ligA)
03400 DNA repair and recombination proteins [BR:
cku03400
]
UL82_03980 (ligA)
Enzymes [BR:
cku01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
UL82_03980 (ligA)
DNA replication proteins [BR:
cku03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UL82_03980 (ligA)
DNA repair and recombination proteins [BR:
cku03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
UL82_03980 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UL82_03980 (ligA)
MMR (mismatch excision repair)
DNA ligase
UL82_03980 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
UL82_03980 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
MauJ
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
AKE41001
UniProt:
A0A0F6TDA4
LinkDB
All DBs
Position
845296..847392
Genome browser
AA seq
698 aa
AA seq
DB search
MIRIARVNHAKTITTEIRRTWDDLANQIRTHRDAYYNATPTITDQAFDELFQELQQLEAE
YPGLATPDSPTATVGAPVAEESGFAKVAHLERMLSLDNVFDEAELGEWLARTPTNGYLTE
LKIDGLSLDLVYRNGRLERAATRGDGRIGEDVTDNARVINGIPHQLVDSTQYPVPSLLEV
RGEVFITMADFIELNAQRQREHENSKSKAKFKPFANPRNAAAGSLRQKDQEAVKKRRLTM
ICHGIGATDGTTFSSQYEAYQALSAWGLPVSPHTKKVSSVTEVIEQVRYWDAHRHDVAHE
IDGLVIKVDELAEQRELGATSRAPRWAIAYKYPPEEVMTTLLDIQVDVGRTGRVTPFAVM
KPVFVAGSTVEKATLHNQTEVKRKGVLIGDTVIIRKAGEVIPEVLGPVVEDRDGSEREFV
FPSQCPSCGYTLAPQKEGDVDWRCPNTQSCPAQLATRLEYIAGRGAFDIAGLGEKAARDL
IHSQVLIDESGLFNLTSEDLLKTAFYRNDDGKLGKVGQNLLKSLETAKNVELWRVIVALS
IRHIGPTAARAIATRYRSLDVAMAASVEDLAETEGVGMIVAQSFKEWFEVPWHQAIVDAW
ANAGVTMADDSSQAPAPVLAGLTIVVTGSLANFTRDSAKEAIVTRGGKASGSVSKKTDFV
VVGENAGSKETKARELGLTILNEAEFEQLLIDGHVREE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgattagaatagccagggtgaaccacgctaaaaccattactactgagattcgtcgcacc
tgggatgacctggctaatcagattcgtacacacagggacgcttattataacgccacccca
acgattaccgatcaagcctttgatgaactttttcaagaattacaacaacttgaagcagaa
tatccaggtcttgccaccccagatagtcctaccgcaaccgtgggcgcaccagtagcagaa
gaatctgggttcgccaaagtggcgcaccttgaacgcatgcttagtctggataatgttttt
gatgaagcagaattgggcgagtggttggctcgcacaccgacaaatgggtatttaaccgag
ctgaaaattgatggtttgtcgctggatttggtgtatcgaaatgggcgtttagagcgtgcg
gctactcgtggtgatggtcggataggcgaagacgtcaccgataatgcacgcgttattaat
ggtattccacaccagttggttgatagtacccaatacccagtaccgagcctattagaggtg
cgcggcgaagtttttattaccatggctgattttattgagttgaatgcgcagcgtcagcgc
gagcatgaaaatagcaagtccaaggctaaatttaagccttttgctaatccacgtaacgct
gctgctggttctttaaggcaaaaagatcaagaagcagtgaaaaaacgtcggcttactatg
atctgccatggcattggtgctaccgacggtacaacttttagcagtcaatatgaggcatat
caggctctttctgcctggggtttaccagtaagcccgcatactaaaaaagtttcttcggta
accgaggttattgagcaagtgcggtattgggatgctcaccgtcatgatgttgctcatgag
attgatggcctagttatcaaagttgatgaattagctgaacagcgtgaactcggtgctacc
tcacgtgctcctaggtgggcaattgcctataagtatccacccgaagaagtaatgactaca
ttgctagacattcaggtagacgttggtcgcaccggtagagtaactccttttgcagtgatg
aaaccggtatttgtggctggatcgactgtggaaaaagctaccttacataaccaaactgag
gtgaaacgtaaaggagtattaatcggcgacaccgtgattatccgcaaagcaggagaggta
attccagaggttcttggacctgttgtcgaagaccgtgacggtagtgagcgcgagtttgta
ttcccaagtcaatgtccctcctgcgggtataccctggctccacaaaaagaaggcgatgta
gattggcggtgccctaatacccagagttgcccagcacagcttgctactcggttggaatat
attgccgggcgaggagcatttgacatcgccggccttggtgaaaaagccgctcgcgactta
attcactcgcaggtacttattgatgagtctgggctatttaatctcactagtgaggatcta
ttaaaaactgctttttatcgaaatgacgatggaaaattaggcaaggtgggacagaattta
ttaaagagcctagaaacagcgaaaaatgtggaattatggcgggtaattgttgcgttatct
attcgccatattggtcctaccgctgcgcgtgcaatcgctactcgctatcgcagtttagat
gtggcgatggcagctagtgttgaagaccttgctgaaaccgaaggcgtaggcatgattgtc
gcacagagttttaaagagtggtttgaagtgccttggcatcaagcgattgtagacgcgtgg
gctaatgcaggggtgactatggctgatgatagtagtcaggcaccagcgccggtgcttgct
ggtttaactattgtagttactggttctttagctaatttcacccgtgattccgctaaggaa
gccattgttactcgaggcggtaaagctagtggttcagtatctaagaaaacagattttgtg
gtggttggcgaaaatgctggctccaaggaaacaaaagctcgggaattgggcctgactatt
ttgaatgaagctgaatttgaacaattgcttatcgacggacacgtgcgcgaagagtaa
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