Corynebacterium kutscheri: UL82_07610
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Entry
UL82_07610 CDS
T03866
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase CsdA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cku
Corynebacterium kutscheri
Pathway
cku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UL82_07610 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cku03019
]
UL82_07610 (deaD)
03009 Ribosome biogenesis [BR:
cku03009
]
UL82_07610 (deaD)
Enzymes [BR:
cku01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UL82_07610 (deaD)
Messenger RNA biogenesis [BR:
cku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UL82_07610 (deaD)
Ribosome biogenesis [BR:
cku03009
]
Prokaryotic type
rRNA helicases
UL82_07610 (deaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
AKE41683
UniProt:
A0A0F6R2I7
LinkDB
All DBs
Position
complement(1629972..1632170)
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AA seq
732 aa
AA seq
DB search
MSITDNATGGENEPDVKILSESQENSQVDYDSLHADVVSDVDDSRVANTSEDTDSVKSTD
NVDSESETVSVSDIASDSVSDSANEAETVETQSGADNVPTGPTFEDLNLPEQILKAVRKV
GFETPSPIQAQTIPVLMEGHDVLGLAQTGTGKTAAFALPILSRIDRKVRHPQALILAPTR
ELALQVADSFQSFADYLGDIHILPIYGGQAYGIQLSGLRRGAQIIVGTPGRVIDHLQKGS
LDISELRFLVLDEADEMLNMGFQEDVERILEDTPEDKQVALFSATMPNGIRRLSKNYMND
PREIQVKSETRTNTNITQRYLNVAHRNKLDALTRILEVTEFEAMIMFVRTKHETEELAEK
LRARGFSAAAINGDIVQAQRERTVDQLKDGRLDILVATDVAARGLDVDRITHVFNYDIPS
DTESYVHRIGRTGRAGRSGEAILFVTPRERRMLRSIERATNATLVEMELPTVDEVNDSRK
AKFADSITESLENKQVEIFRALVKNYSEEHDVPLEDIAAALATQARAGDEFLMKEPPADR
RRDRDRRRDRFDDYDRGGRRDRFDDDRRGDRGSRFERPNKDMVVYRLAVGKRQHVRPGSI
VGALANEGGLNNKDFGRISIAVDHTLVELPRDMKPSVLDNLSDTRISGQLINIERDDNAQ
IPAGGGRGGRRDRFDDDRRGGRYRDRDDRGGRRGGWNNDRDDRGGRRYNDDRRGGRYRDR
DDRGGRRGGWRD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaccgataacgccaccggcggcgagaatgagccggacgtaaagattttgtcg
gaatctcaggaaaattcgcaggtagactatgactcacttcatgctgatgtcgtgagtgac
gtagacgactccagggttgcgaacacttctgaggacaccgactccgtaaagagtacggac
aatgtagacagtgagagtgaaaccgtgagtgtttcggatatagcgagtgactcagtaagt
gactccgcaaatgaggcggagaccgtggagactcagagcggtgcagataatgtgccaacc
ggaccaacttttgaagacctaaatctgcctgagcagattttgaaagctgtgcgtaaggtg
ggctttgaaaccccatcgccaattcaggcacagacaattcccgttcttatggaaggacac
gatgtactcggtcttgcccagaccggtactggtaagactgccgccttcgcgctgccgatt
ctttcgcgcattgatcgcaaggtgcgtcatccacaagcgcttattctagcgccaacccgc
gaattggctttgcaggttgccgatagtttccagtcttttgcagattacttaggtgatatt
catatcctgccgatttatggtggtcaggcgtatggtattcagctttctggtttgcgtcgt
ggtgcccaaattattgttggcaccccaggtcgggttattgaccacttgcaaaagggttcc
ttggatatttctgagctacgctttttggtcctcgatgaagccgatgaaatgttgaacatg
ggcttccaagaagatgtggaacgcatcttggaggatactccagaggataagcaggtagcg
ttgttctcagcgacgatgcctaatggtattcgtcgtttatcaaagaattatatgaacgac
ccgcgtgaaattcaggtgaagtctgaaactcgcactaataccaatattacgcagcgctat
ttaaatgttgctcaccgcaacaagctcgatgcattgactcgaatccttgaagtcaccgag
tttgaagcaatgatcatgtttgtgcgcactaagcatgaaactgaagaactcgctgagaaa
ttgcgtgcacgtggtttttctgcagctgcaattaacggtgatattgttcaggcgcagcgt
gagcgcaccgtcgatcagcttaaagatggtcgactcgatattttggttgctaccgacgtg
gcagctcgtggtcttgatgttgatcgcattacacatgtatttaactacgacattccaagc
gatacggagtcttatgtgcaccgtattggtcgtaccggtcgtgctggtcgttcgggcgag
gcaattttgtttgtcaccccacgtgagcgtcgcatgttgcgttccattgagcgagcaacc
aatgccacactggtggaaatggaacttcctactgttgatgaggttaatgattcgcgcaag
gctaaatttgctgattccattaccgaatctttggaaaataagcaggtagagatcttccgt
gctttagtaaagaattattctgaagaacacgatgttccactagaagatattgctgctgcg
ctagctacccaggcacgtgccggtgatgagttccttatgaaggaaccacctgctgatcgc
cgccgtgatcgtgaccgtcgtcgggatcgctttgatgattatgatcgcgggggtcgtcga
gatcgtttcgacgatgatcgtcgtggtgatcgaggttcacgtttcgagcgtccgaacaag
gacatggttgtgtaccgcttagcggtgggcaaacgtcagcatgttcgcccaggatctatc
gtgggtgcgctagctaatgagggcggtttgaacaataaggactttggtcgtatttctatt
gcggtagatcacaccctggtggagctaccacgcgatatgaagccaagcgtattggataac
ctgagcgatactcgcatttctggtcagcttattaatattgagcgcgatgataacgctcag
attccagctggcggtggacgtgggggccgtcgagatcgtttcgacgatgatcgtcgtggc
ggacgctaccgggatcgtgatgaccgtggcggacgacgtggcggctggaataacgatcgc
gatgaccgtggcggacgacgctataatgatgatcgtcgtggcggacgctaccgggatcgt
gatgatcgcggtggacgacgcggtggctggcgcgactaa
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