Chryseobacterium lactis: EG342_25200
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Entry
EG342_25200 CDS
T06580
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
clac
Chryseobacterium lactis
Pathway
clac00521
Streptomycin biosynthesis
clac00523
Polyketide sugar unit biosynthesis
clac00541
O-Antigen nucleotide sugar biosynthesis
clac01100
Metabolic pathways
clac01110
Biosynthesis of secondary metabolites
clac01250
Biosynthesis of nucleotide sugars
Module
clac_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
clac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EG342_25200 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EG342_25200 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EG342_25200 (rfbC)
Enzymes [BR:
clac01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EG342_25200 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZA85002
UniProt:
A0A3G6RV38
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All DBs
Position
complement(5609192..5609737)
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AA seq
181 aa
AA seq
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MKIKETPLKDCYIIEPTIFEDDRGYFFEKFNEKKFEELTGMNGHFVQDNISKSSYGVLRG
LHLQKGEHAQAKLVSCLEGSVWDVAVDLREDSPTFGQWFGIELTAENKLQLYIPRGFGHG
FSVLSTNAVFSYKCDNFYNKDSEGSVKFDDLDLDIDWKIDDQDAILSEKDKNAPGFKEKN
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataaaagaaactcccctaaaagattgttacattatagaacccaccatctttgaa
gatgacagaggctatttctttgaaaaattcaacgagaagaaattcgaagaattaacagga
atgaacgggcattttgtacaagataacatttctaaatcttcttacggagtactgagagga
ctgcaccttcagaaaggagaacatgctcaggcgaaattggtgtcgtgccttgaaggaagt
gtttgggatgttgcggtagatcttcgcgaagattctcccacattcgggcagtggttcgga
attgaactgacggctgaaaataaactacagctttatattccaagaggttttggacacggt
ttttccgtattaagtaccaatgctgtattttcgtataaatgtgataacttttataacaaa
gattcagagggcagtgtgaaatttgatgacctggatcttgatatcgactggaaaattgat
gatcaggatgcaatcctttcagaaaaagataagaatgctcccggatttaaagaaaaaaac
ttttaa
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