Clostridium sp. BNL1100: Clo1100_3614
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Entry
Clo1100_3614 CDS
T01708
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clb03009
]
Clo1100_3614
Enzymes [BR:
clb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Clo1100_3614
Ribosome biogenesis [BR:
clb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Clo1100_3614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Cons_hypoth95
Methyltransf_25
Methyltransf_15
MTS
Met_10
PrmA
Methyltransf_11
PCMT
Methyltransf_4
Ubie_methyltran
NagA_C
Bag6_BAGS
Motif
Other DBs
NCBI-ProteinID:
AEY67738
UniProt:
H2JAE4
LinkDB
All DBs
Position
complement(4088465..4089847)
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AA seq
460 aa
AA seq
DB search
MKQPSQKILSQNKTYKIDITGLTHEGQGVGKIEGFVVFVDGVLPGENVDVKIVKQTKSYA
VGRLVKINNSSEDRVKPFCPVYDKCGGCAVQHMSYQAQLDFKKDTVLQNIRRIGGLQDVT
VNNTIGMENPYKYRNKVQYPVGSNNGEIRIGFYETRSHNIIDGNLCDIQPDESNEIRDVV
RNFCKDAGIAIYDEKTGKGLLRHVMVRKGFKTGEIMVVLVVNGDILVKSDELVKKLLKGF
PDIKSIILNVNTRNTNIILGDKNICIYGQKYITDFIGSFRFEISPLSFFQVNPIQTEVLY
EKALEYAGLSGNETVFDLYCGIGTISLFLSQKAKRVVGVEVVADAISDAKRNAEINDVSN
VEFLVGEAEKVIPELYAQGVKADVVVVDPPRKGCDEVLLNTLVEMQPQRIVYVSCNPSTL
ARDLKYLTEHGFEVKEVQPVDMFPWTGHVETVVLMSRVEK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagccttctcaaaagatattatcacagaataaaacatataaaattgatataacg
ggtttaactcatgaaggacagggtgtaggtaaaattgagggatttgtagtttttgttgac
ggggttcttcccggagaaaatgttgacgttaaaatagtaaaacagaccaagagctatgca
gtgggaaggcttgttaaaataaacaattcttcagaggacagagtaaaaccattttgtcca
gtctatgacaaatgcggaggttgtgcggttcagcatatgtcttatcaggcacagctggat
tttaaaaaggatactgttctgcaaaatatcagaagaattggcggccttcaggatgttaca
gtaaataacacaattggaatggaaaatccatataagtacaggaataaggtccaatacccg
gttggttctaataatggtgaaatcagaatcgggttctatgagacaaggtctcataatatt
attgacggcaatttgtgtgatatccagcctgatgagagtaatgaaataagggatgttgta
agaaatttttgcaaggatgcaggtatagcaatttatgatgagaaaaccggcaagggacta
cttcgccacgtaatggttagaaagggctttaaaaccggtgaaattatggtggtgctggtc
gtcaacggtgatatactggtaaaatcggatgaactggttaaaaagctgcttaaaggattt
ccagatattaagagtattattttaaatgtaaataccagaaataccaatattattcttggg
gataaaaatatatgtatttacgggcagaagtacataactgactttattggaagtttcaga
tttgagatttctcctttgtctttttttcaggtgaatcctattcagacggaagttttgtat
gaaaaggctcttgaatatgcaggcctttccgggaatgaaacggtttttgacctttactgt
ggtataggaactatttcgcttttcctttctcaaaaggcaaagcgtgttgtaggggtagag
gttgttgctgatgctattagtgatgctaaaagaaatgctgaaatcaatgatgtctctaat
gtagaattcctggtgggagaggcagagaaggttatacctgagctgtatgcacagggagta
aaagcggatgtggtggttgtagacccaccaaggaaaggctgtgacgaggtgctgcttaat
actttggtggaaatgcagccacagcgaattgtttacgtaagctgtaatccgtccacgctg
gcaagggaccttaaatacctgacagaacatgggtttgaagtgaaggaagtgcagccggtg
gatatgtttccgtggacggggcacgttgagacggtcgtattgatgtcaagggttgagaaa
taa
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