Cellulophaga lytica HI1: IX49_04270
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Entry
IX49_04270 CDS
T03279
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
clh
Cellulophaga lytica HI1
Pathway
clh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IX49_04270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clh03400
]
IX49_04270
Enzymes [BR:
clh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
IX49_04270
DNA repair and recombination proteins [BR:
clh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
IX49_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AIM59772
LinkDB
All DBs
Position
complement(964174..964737)
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AA seq
187 aa
AA seq
DB search
MEKHRCGWCVGDDLYEAYHDKEWGTPVKDDKLLFEFLILETFQAGLSWITILRKRENFRK
AFDNFDYKKIVNYKQDKIDALLQDAGIIRNKLKVNSAITNAAAYIKIQKEFGSFSAYIWS
FVNNKPIKNALTSYKEGPANTPLSDAISKDLKKRGFKFVGSTVVYAFMQATGMVNDHEIS
CFRYNEV
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaacacagatgtggttggtgtgtaggagatgatttgtatgaggcatatcatgac
aaagagtggggaactcctgtaaaggatgataaattgttatttgagtttttaattttagaa
acttttcaggctgggttaagttggataacaattttacgtaagcgagaaaattttagaaaa
gcctttgataatttcgattataaaaaaattgtaaattacaaacaagataaaatagatgct
ttgttacaagatgcaggtattattagaaataagctaaaagtgaactctgctataaccaat
gcagctgcttatattaaaatacaaaaagagtttggtagttttagtgcttacatatggagc
tttgtaaacaacaagccaataaaaaatgcgttaactagttataaagaagggcctgcaaac
acgcctttgtctgacgctataagtaaagacttaaaaaaaagaggatttaaatttgtaggt
agtacggttgtttatgcgtttatgcaggcaacaggtatggttaatgatcatgaaattagt
tgttttagatataatgaagtgtag
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