Nitratidesulfovibrio liaohensis: KPS_003258
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Entry
KPS_003258 CDS
T09362
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
clih
Nitratidesulfovibrio liaohensis
Pathway
clih00550
Peptidoglycan biosynthesis
clih01100
Metabolic pathways
clih01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KPS_003258 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KPS_003258 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clih01011
]
KPS_003258 (mrdA)
Enzymes [BR:
clih01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KPS_003258 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
clih01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
KPS_003258 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WMW65152
UniProt:
A0AA51URF2
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All DBs
Position
3827304..3829592
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AA seq
762 aa
AA seq
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MRIQFEPEGFQPPRAGLILLQCLVAGLFFLFVVRFWYLQIHRGEEFARLARENRLRQERI
YASRGLLRDRDGRLLAENRPAFGLALVREDCRDIPSTLAQVSEWTGIPLEQLTAKFNQDR
QRVKPFEHLLLISDMPFDLLARIENRVLQWPGLEIVTRSKRNYPQGELMAHILGYVAEAN
EKELEDDKDLNLGDFVGKQGLELVLERRLRGQKGLHQLEVDVLGRQLNKKLVQEPVSGEN
IDLAIDLGLQQVAWDALEDETGCVVAMDPDTGKLLALVTKPSFDNNAFAAGLSLKEWTAL
RDNPRHPLQNRVIQSVYPPGSVWKLMMAGMLLNEGVNPADSVWCTGEVALGKQVFRCWKK
GGHGRVDMMRSLIESCDVYYYQMSDRFGIDKIEAFAKACGFGAPTGIDLPHEKSGLVPSK
QWKRRRFGEPWHRGETLNVSIGQGFTLVTPVQVAAFVSALMNGGKLLKPSLLADEDPAVR
SSLPFTAAGRKMILDGMRLTVNDDRGTAKVLRRPDAVMGGKTGTAQVTKLKMVGEERVRT
ENLAYEHRDHAWIATWGEKAGKRLVVVVMVEHGGHGGSDAGPVARRVYDKFFGPPPGASS
GVPSGAAPQAPAGQVAPTGPSSRATPAGPATSPATPGVTAPAQQTLSAPAARPVAPTRPD
QAAGAPGQSGQPDQPGQLDQQDQQEEGLRIVPTGRSARPAGRDRTTGRAVEAPEVEDARE
GLHRYDPDTFDPDAATPDGRGSDDGVVPPLRRFQNVAPEDGQ
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatccagtttgagcctgaaggcttccagccgccccgcgcgggtttgatactgctc
cagtgccttgtggcggggctgtttttcctgttcgtggtgcgcttctggtacctgcagatt
caccgtggcgaggaattcgcacgcctggcccgcgaaaaccggttgcgccaggaacgcatc
tacgcttcgcgcgggctgctgcgcgaccgtgacgggcgcctgctggccgaaaaccggccc
gccttcggtctggccctggtgcgcgaagactgccgcgacattccctccaccctggcccag
gtcagcgagtggacgggcatccccctcgaacagctcaccgccaagttcaaccaggaccgc
cagcgggtgaagcccttcgagcatctgctgctcatctccgacatgcccttcgacctgctg
gcgcgcatcgagaaccgggtgctgcaatggccgggcctggagatcgtcacccgttccaag
cgcaactacccgcagggcgagttgatggcccacattctggggtatgtggccgaagccaac
gaaaaggaactggaggacgacaaggacctgaaccttggcgacttcgtgggcaagcagggg
ctggaactggtgctggaacgccgcctgcgcggccagaagggcctgcaccaactggaagtg
gacgtgctgggccgccagctgaacaagaagctggtgcaggagccggtgagcggcgagaac
atcgacctcgccatcgacctcggattgcagcaggtggcctgggacgcgctggaagacgaa
accggctgcgtggtggccatggaccccgacaccggcaagttgctggccctagtcaccaag
ccgtcgttcgacaacaacgcctttgcggccggactttcgttgaaggaatggacggccctg
cgcgacaacccccgccaccccttgcagaaccgcgtcatccagagcgtgtatccgcccggc
tcggtatggaaactgatgatggcgggcatgctgctgaacgaaggcgtgaaccccgccgac
tcggtgtggtgcacgggcgaggtggcgctgggcaagcaggtgttccgctgctggaagaag
ggcggccatggccgcgtggacatgatgcgctcgctcatcgaatcgtgcgacgtgtattac
taccagatgagcgaccgcttcggcatcgacaagatcgaggcctttgccaaggcctgcggc
ttcggcgcgcccacgggcatcgacctgccgcacgaaaagtcgggcctggtgccctccaag
cagtggaagcgccgccgcttcggcgagccgtggcaccggggcgagacgctgaacgtctcc
atcggccagggcttcaccctggtcacgccggtgcaggtggcggccttcgtgtccgccctg
atgaacgggggcaagctgctgaagcccagcctgctggccgacgaggacccggcggtgcga
tcctcgctgccgttcaccgccgccgggcgcaagatgattctcgacggcatgcgcctgacc
gtcaacgacgaccggggcaccgccaaggtgctgcgccgccccgatgccgtcatgggcggc
aagaccggcaccgcgcaggtcaccaagctgaagatggtgggcgaggagcgcgtgcgcacc
gaaaacctggcctacgagcaccgtgaccacgcctggatcgccacatggggagaaaaggcg
ggcaagcggctggtggtggtggtcatggtggagcacggcgggcacggcggttccgacgcc
ggtcccgtggcgcgccgggtgtacgacaagtttttcggtccgcctccgggggcatcgtcc
ggggtgccttcgggtgctgcgccgcaagcgcctgccgggcaggttgccccgaccggacct
tcatcccgggcgactccggcaggcccggcgaccagcccggccactccgggcgtgaccgct
ccggcgcagcagacgctttccgcacctgcggcccgcccggttgcgcccacccgtccggat
caggccgcgggcgcgcccgggcaatcaggtcagcccgatcagcccggtcaactggaccag
caggaccagcaggaagaagggctgcgcatcgtgcccacgggccgttcggcgcgtcccgcc
gggcgcgaccgaacgacgggcagggcggtcgaggcccccgaagtcgaggacgcgcgcgag
ggcctgcaccgctacgaccccgacaccttcgatcccgacgccgccacgccggacgggcgg
ggcagcgacgacggcgtggtgccgccgctgcggcgcttccagaacgtggccccggaggac
ggacaatga
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