Chondrinema litorale: OQ292_21510
Help
Entry
OQ292_21510 CDS
T09098
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
clit
Chondrinema litorale
Pathway
clit02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OQ292_21510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clit03021
]
OQ292_21510
Transcription machinery [BR:
clit03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OQ292_21510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
NEMO
HTH_24
HTH_23
HTH_16
HTH_11
Spore_III_AB
DDE_2
HTH_10
Motif
Other DBs
NCBI-ProteinID:
UZR96724
LinkDB
All DBs
Position
unnamed2:296645..297214
Genome browser
AA seq
189 aa
AA seq
DB search
MKSYKEITDTELIFRFSSNDQQAFNEIFNRYWKLLYKYTFNILNDNALTEDCLQEVFTNV
WVRRNELEINNLKNYLFSSVRFRAISRIRQAKFTSFNEEIIDSLVVDEEILYEVEELEET
IKAAADQLTDRCKEIFLRSRFQHQSNKEIAESLNISIRTVENQLSIALKHIRNVLQNSGS
LAILLLFYL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
ttgaagagctataaagaaataacagatacagagttgatttttcgtttttccagtaacgat
cagcaagcctttaatgaaatttttaaccgctactggaagctgctctataaatatactttc
aatattttaaatgacaatgccctcaccgaagactgtttacaagaagtttttacaaatgtt
tgggttagacgtaatgagcttgaaattaataatttaaagaactatctattctcatctgtt
aggtttagagctatttcaagaataagacaagctaaattcacttcctttaatgaagaaata
atagattctttggttgtagatgaagaaattctttacgaagtggaagagctggaagaaacc
attaaagctgctgctgaccaattgacagaccgatgtaaagaaatctttttaagaagtcga
ttccaacaccaaagcaacaaagaaatcgctgaatctttgaacatctctatccgaacggta
gaaaatcaattatctattgccctcaaacatattagaaacgtgctacaaaattctggtagc
ttggctattctattgcttttctatttataa
DBGET
integrated database retrieval system
