Clostridium ljungdahlii: CLJU_c12550
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Entry
CLJU_c12550 CDS
T01276
Name
(GenBank) predicted primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
clj
Clostridium ljungdahlii
Pathway
clj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLJU_c12550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clj03400
]
CLJU_c12550
Enzymes [BR:
clj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLJU_c12550
DNA repair and recombination proteins [BR:
clj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLJU_c12550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
AAA_30
AAA_19
SLFN-g3_helicase
nSTAND3
T2SSE
Flavi_DEAD
zinc-ribbons_6
AAA_11
IstB_IS21
YjdM_Zn_Ribbon
AAA_23
FtrD-like
TrwB_AAD_bind
PIF1
Viral_helicase1
zinc_ribbon_15
SRPRB
PhoH
AAA_22
DUF1258
Motif
Other DBs
NCBI-ProteinID:
ADK14323
UniProt:
D8GRX0
LinkDB
All DBs
Position
1354794..1356995
Genome browser
AA seq
733 aa
AA seq
DB search
MYTYAGIIVNNSSVKLDKIFTYKIPDKLSGKISIGSRVKIPFGMGNNKLDGFVVRLYEDD
IESRKIKEISDICEKFPLFTKEDLTLIEKMREIYLCTYLECIRVFIPRGTLKGMKKKKES
LIYIGKDLEGNFNKEPYIDIYKVVKENNGVYTKNFISKNYKLSLSSINTMIKHGFLVVNE
KTVDRYDVRQYRAYSKKVLNSEQQYAVDNIINSDKNIFLIHGVTGSGKTEIYMHLVEKAM
DKGKESIILVPEIALTPQMVERFKGRFGKNISVFHSKLSDGERYDEWMRVKLGQVKVAIG
ARSAVFLPFNNLGLIIIDEEHEWSYKSDSNPKYNAREIGQMKCKQYNCKMILGSATPSIE
TYYKCKTGEIELIDIKNRADGALMPEVEIVDMRQELINNNKSIFSRELYQCICNRLSKGE
QIILFLNRRGYSTFVSCRKCGYVFKCNNCDISYTYHQNQRKLVCHYCGSRIEVPKVCPKC
GSKYVKYFGVGTEKVENQIKAYFPKARTLRMDFDTTRSKNSYENIYNTFKQGKADILIGT
QMVAKGLDFKNVTLVGVVAADLSLNLPDFKSTERTYELITQVSGRAGRGEKPGKVIIQTY
NPENYSIRYAAKNDYDSFYREEIGIRENMSYPPFADILLINMNSKNENVLIKNIQNVGIF
LKKLLEKDDKIIILGPCPCQISKIKELYRWQIILKGKITINIAQNVKEVVYDLLKDVYND
IRVSIDRNPNSML
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtatacatatgcaggtataattgtaaacaatagttctgtaaaattagataaaattttt
acctataaaataccagataagttaagtggaaaaattagtataggttctagagtaaaaata
ccttttggtatgggaaacaataaattagatggatttgtagttaggttatatgaagatgat
atagaaagcaggaaaattaaagaaataagtgatatatgtgaaaaattcccgctttttaca
aaagaagatttaactcttatagaaaaaatgagagaaatatacttgtgtacatatctagaa
tgtataagagtgtttattccgaggggaacacttaaaggaatgaaaaagaaaaaggaaagc
ctaatttatattggtaaagatttagaaggaaactttaataaagaaccatacatagatata
tataaagtagtaaaagaaaacaatggagtatacactaagaactttataagcaaaaattat
aaattatccctatcatctataaatactatgataaaacatggatttcttgtggttaatgag
aaaactgtagataggtatgatgtaagacagtatagagcgtattctaaaaaggtactgaat
agtgagcagcagtatgcagtagacaatataataaactcagataaaaacatatttttgatt
catggagtcacaggtagtggtaaaactgaaatttacatgcatcttgttgaaaaggctatg
gataaaggtaaggaatccataatactggtgccggaaattgcacttactccacaaatggtt
gaaagatttaaaggaagattcggaaaaaatataagtgtatttcatagcaaattatcagat
ggggaaagatatgatgaatggatgagggtaaagcttggccaggtgaaagttgcaattggt
gcaagatctgcggtatttcttccatttaataacttaggacttataataatagatgaagaa
catgagtggagctacaaatcagacagtaatccaaagtataatgctagagaaattggacag
atgaaatgtaaacaatacaattgtaaaatgatacttggctcagccacaccttctatagaa
acgtattataaatgtaagactggtgaaattgaacttatagatataaaaaacagagcagat
ggggcacttatgccagaagttgaaattgtagatatgaggcaggaacttataaataacaat
aaatctatattcagtagggaactttatcaatgtatttgtaacagactttcaaagggtgaa
cagataatattgtttttaaataggagaggctattccacctttgtttcttgcagaaaatgt
ggttatgtatttaaatgcaataattgtgatatatcctatacctatcaccagaatcaaaga
aaacttgtttgtcattattgtggaagcaggatagaagtacctaaagtttgccctaaatgt
ggcagtaaatatgttaaatattttggtgtgggaacagaaaaggtggaaaaccagataaaa
gcttatttccctaaagcaagaacacttagaatggattttgatactacaagaagtaaaaat
tcttatgaaaatatctataatacattcaaacagggaaaagcagatatacttataggaact
caaatggtagcaaaaggtttggattttaaaaatgtaactttagtaggtgtagtggctgca
gatttgtcccttaatttgccggattttaaatctacagagaggacatatgaacttataacc
caagtttcaggaagggcaggtagaggagaaaagcctggaaaagtaattattcaaacttat
aatcctgaaaattacagcataagatatgcagctaaaaatgattacgatagtttttatagg
gaagaaattggaataagggaaaatatgagttatcccccatttgcagatatacttcttata
aatatgaatagtaaaaatgaaaatgtattaataaaaaatatacaaaatgttggtatattc
ttaaaaaaacttcttgaaaaagatgataaaattataatattaggaccatgtccctgtcaa
atatcaaaaataaaggaattgtacaggtggcagataatattaaaaggaaagataaccata
aatattgcacaaaatgttaaagaagtagtttatgatttattgaaagatgtttataatgat
ataagagttagtatagataggaatcctaacagtatgttgtaa
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