Campylobacter lari subsp. concheus LMG 11760: CONCH_1146
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Entry
CONCH_1146 CDS
T03557
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Pathway
cll03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CONCH_1146 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cll03400
]
CONCH_1146 (uvrB)
DNA repair and recombination proteins [BR:
cll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CONCH_1146 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CONCH_1146 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
Microtub_bd
SWI2_SNF2
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AJC89552
LinkDB
All DBs
Position
1111392..1113365
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AA seq
657 aa
AA seq
DB search
MFELTSDFKPSPDQKQAIDGIVKSIQAGNKYQTLLGVTGSGKTFTMANIIKNLNIPTLIM
SHNKSLCAQLYSEFKGFFANNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSASASLLSYEDVICIASVSANYGLGNPSEYVGMVLILELNMQISQKELLKKLVDMGYKR
NDNFFDRADFRVNGDIVDIYPAYYEDEAIRLEFFGEELEAMYHYNVLENKKGKDLKKFIL
YPTSQFSVGEVRLKEAIKGIKAELNERLAYFENENKLVEAQRLKQRVEFDLEMLQSTGMC
KGVENYALHLTGLKSGDTPYTLFDYFAIKNQDFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCKFLFVSATPAPLELELSKENIFYQIMRPTGLLD
PKIEIKDSENQVEILYDEAKKVIERNERVLITVLTKKMAEELSKYYLELGLKVKYMHSEI
DAIERNEIIRGLRSGAFDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTALIQTMG
RAARNVNGKVLLFAKKITKSMQEAIDTTNERRALQEAYNKKHNITPTSVKRNIEESLKHE
LEQGEIYRKGKELEKMPAKERAKIVKELRKQMLEAAKNLEFEKAAMLRDEINKLRTL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacttactagtgattttaagccaagtcctgatcaaaaacaagccattgatggt
atagtaaaaagcattcaagcaggcaataaataccaaaccttgctaggtgttacaggcagt
ggaaaaactttcactatggcaaatatcattaaaaacttaaacatacccactcttatcatg
agtcacaataaaagcttatgtgcacaactttatagtgaatttaaaggcttttttgcaaat
aatcatgtggagtattttataagctattatgattattatcaacccgaggcttatatacca
agaacggatgtttttatagaaaaagatagctctactaatgaagatttagaaagattaaga
ctaagcgcaagtgcttcgcttttaagttatgaagatgttatttgtatagctagtgtttca
gcaaattatggtttaggaaatccaagtgagtatgtgggtatggttttaattttagaacta
aatatgcaaatttcacaaaaagaacttttaaaaaaacttgtagatatgggctataaacgc
aatgataatttctttgatagggctgattttagagtaaatggagatatagtagatatatat
ccagcttattatgaggatgaagctattagacttgagttttttggagaagagcttgaggcg
atgtatcattataatgtcttagaaaataaaaaaggtaaagatttaaaaaaatttatactt
tacccaactagtcaatttagcgtaggtgaagttagacttaaagaggctataaaaggcata
aaagctgaattaaatgaacgccttgcttattttgaaaatgaaaataaactcgtagaagca
caaaggctaaaacaaagagtagaatttgaccttgaaatgcttcaaagcactggcatgtgt
aaaggagttgaaaattatgctttgcatttaacagggcttaaaagtggcgatacaccttat
acgctttttgattattttgctattaaaaatcaagactttttagtcattgtagatgaatcc
catgtatctttaccacaatttcgcgggatgtttgcaggggatagaagcagaaagcaaact
ttggttgattatggttttcgtttgccaagcgccttagataatagacctttgatgtttgat
gaatttattaataaaaattgtaaatttttatttgtttcagctacacctgcacctttagaa
ctagaattaagtaaagaaaatattttttatcaaatcatgcgtccaacagggcttttagat
cctaaaatagaaatcaaagatagtgaaaatcaagtagaaattttatacgatgaagctaaa
aaagttatagagcgcaatgaaagagttttaataaccgttttaactaaaaaaatggccgaa
gagcttagtaaatactacttagaacttggcttaaaagtaaaatacatgcattcagaaatt
gacgcaatagaacgtaatgaaatcatccgtggtttaagaagtggtgcttttgatatttta
atcgggattaatcttttaagagaagggcttgacttgcctgaagtttctcttatagctatt
atggatgcagataaagaaggctttttaagaagtaccactgcgctcattcaaaccatggga
cgtgctgctagaaatgtcaatggaaaagttttactttttgccaaaaaaatcacaaaatct
atgcaagaagctatcgatactaccaatgaaagaagggctttgcaagaagcttataataaa
aaacacaacattacaccaacctcagtaaaaagaaatatagaagaaagtttaaaacatgaa
cttgagcaaggagaaatttatcgtaaaggcaaagaacttgaaaaaatgcccgcaaaagaa
cgcgccaaaatagtaaaagaattaagaaaacaaatgttagaagctgctaaaaatcttgaa
tttgaaaaagcggcaatgcttagagatgagattaataaattaagaactttataa
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