Campylobacter lari NCTC 11845: UPTC3659_1414
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Entry
UPTC3659_1414 CDS
T03552
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
cln
Campylobacter lari NCTC 11845
Pathway
cln03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UPTC3659_1414 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cln03400
]
UPTC3659_1414 (uvrB)
DNA repair and recombination proteins [BR:
cln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UPTC3659_1414 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UPTC3659_1414 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
Kinesin
UB2H
Focal_AT
Microtub_bd
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJD02246
UniProt:
A0A0A8HXS2
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All DBs
Position
1417779..1419752
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AA seq
657 aa
AA seq
DB search
MFELTSDFKPSPDQKQAIDGIVKSIQAGNKYQTLLGVTGSGKTFTMANIIKNLNMPTLIM
SHNKSLCAQLYSEFKGFFANNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSASASLLSYDDVICIASVSANYGLGNPSEYVGMVLILELNMQISQKELLKKLVDMGYKR
NDNFFDRADFRVNGDIVDIYPAYYEDEAIRLEFFGDELEAMYHYNVLENKKGKDLKKFIL
YPTSQFSVGETRLKEAIKGIKAELNERLAYFENENKLVEAQRLKQRVEFDLEMLQSTGMC
KGVENYALHLTGLKSGDTPYTLFDYFAIKNQDFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCKFLFVSATPAPLELELSKKNIFYQIMRPTGLLD
PKIEIKDSDNQVEILYDEAKKVIERNERVLITVLTKKMAEELSKYYLDLGLKVKYMHSEI
DAIERNEIIRGLRSGAFDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTALIQTMG
RAARNVNGKVLLFAKKITKSMQEAIDTTNERRVLQESYNKRYNITPTSAKRNIEESLKQD
LEQGEIYRKGKELEKIPAKERAKIVKELRKQMLEAAKNLEFEKAAMLRDEINKLRIL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacttactagtgattttaagccaagtcctgatcaaaaacaagccattgatggt
atagtaaaaagcattcaagcaggcaataaataccaaaccttgctaggtgttacaggtagt
ggaaaaactttcactatggcaaatatcattaaaaacttaaacatgcccactcttatcatg
agtcacaataaaagcttatgcgcgcaactttatagcgaatttaaaggtttttttgcaaat
aatcatgtggagtattttataagctactatgattattatcaaccagaagcttatatacca
agaacagatgtttttatagaaaaagatagctctactaatgaagatttagaaagattaaga
ctaagcgcaagtgcttcgcttttaagttatgatgatgttatttgcatagctagtgtttcg
gcaaattatggtttgggaaatccaagtgagtatgtaggtatggttttaattttagagcta
aatatgcaaatttcgcaaaaagaacttttaaaaaaacttgtagatatgggttataaacgc
aatgataatttctttgatagagctgattttagagtaaatggagatatagtagatatatat
ccggcttattatgaagatgaagctattaggcttgagttttttggcgatgagcttgaggcg
atgtatcattacaatgtcttagaaaataaaaaaggtaaagatttaaaaaaattcatactt
tacccaaccagtcaatttagtgtaggtgagactagacttaaagaagctataaaaggcata
aaagctgaattaaatgaacgccttgcttattttgaaaatgaaaataaactcgtagaagca
caaaggttaaaacaaagagtagaatttgaccttgaaatgcttcaaagcactggcatgtgt
aaaggagttgaaaattacgctttgcatttaacaggacttaaaagcggtgatacaccttat
actctttttgattattttgccattaaaaaccaagactttttagtcattgtagatgaatcc
catgtatctttaccacaatttcgagggatgtttgcaggggatagaagtagaaaacaaact
ttggttgattatggttttcgcttgccaagcgccttagataacagacctttgatgtttgat
gaatttattaataaaaattgcaaatttttatttgtttcagccacgcctgcacctttggaa
ctagaattaagcaaaaaaaacattttttatcaaattatgcgcccaacaggacttttagat
cctaaaatagaaatcaaagatagtgataatcaagttgaaattttatatgatgaagctaaa
aaagttatagaacgtaacgaaagagttttaatcactgttctaaccaaaaaaatggctgaa
gagcttagtaaatactacttagatcttggcttaaaagtaaaatacatgcattcagaaatt
gacgcaattgagcgcaatgaaatcatccgtggtttaagaagtggtgcttttgatatttta
ataggtattaatcttttaagagaagggcttgatttacctgaagtttctctcatagcaatt
atggacgcagacaaagaaggttttttaagaagcaccactgcgctcattcaaaccatggga
cgtgcggctagaaatgtaaatggcaaagtattgctttttgccaaaaaaattacaaaatct
atgcaagaagccattgatactaccaacgaaagaagagtcttgcaagaatcttataataaa
agatataatatcacgccaacttcagcaaaaaggaatatagaagagagtttaaaacaagat
cttgagcaaggagaaatttatcgcaaaggcaaagaacttgaaaaaattcctgcaaaagaa
cgcgctaaaatagtaaaagaactaagaaaacaaatgctagaagcagctaaaaatcttgaa
tttgaaaaagcagcaatgcttagagatgagattaataaactaagaattttatag
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