Condylostylus longicornis: 129610169
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Entry
129610169 CDS
T09756
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
clon
Condylostylus longicornis
Pathway
clon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129610169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clon03041
]
129610169
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129610169
Spliceosome [BR:
clon03041
]
Complex A
U2 snRNP components
U2 related factors
129610169
Complex B
129610169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
129610169
NCBI-ProteinID:
XP_055378561
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MSSRSSSTREKYRERKRSRSRSRSKSPSERERKKKEDSKSSKSRLKEERREEKRRKRSRS
RSKHRESSRRDRSKDRREHEREKDRERERERERERRTDSIKSNCEKEFFNKEKNVTKSKE
DEIEQSESSEEELDKEEEQKRLEQEMIKRRERIERWRAERKLKELENKKDIPKIVLPLNV
KKWSLEDESEDEDENTKDGRKKPGLDLNDENNENDEIKSQNKKPEEKKEDEEEIDPLDAF
MQDIDKEVRKVNQLSNPPDQNKSSDSKGVVIVTGLAKKRVERSNKGELIEQNQDGLDYSS
EEELEDIKDAAVNLANKHKKELAKINHSEVNYSSFRKDFYVEVPELARMTNEEVEKHRSE
LEGIQVKGKGCPKPIKTWAHCGVSKKEMDVLVKKLCFEKPTPIQCQAIPAIMSGRDLIGI
AKTGSGKTIAFILPMFRHILDQPPLEEGDGPIAIIMTPTRELCMQIGKDIRKFSKSLGLR
PVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMF
DMGFEPQVMRIIDNIRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKDVEQ
NIAVLEDDAKFFKLLELLGLYQEHGSIIVFVDKQENADSLLKDLMKASYPCMSLHGGIDQ
FDRDSTILDFKSGKVRLLIATSVAARGLDVKDLILVVNYDCPNHYEDYVHRVGRTGRAGN
KGFAWTFLTTEQGRYAGDIIRALELSSTPVPLELQELWDTYKALQEAEGKKVHTGGGFSG
KGFKFDEQEANAVKESKKLQKAALGLADSDDDEDIENDIDQQIENMFAAKRNIKETSVAP
TIPPPQIVVPSIAAITVPNLQPPIIPTTGPVSAEKLELAKRLASKINTAKNLGLDTKTTQ
QTAEAILKGSSSAPPLITARTVVEQLAAKLNNKLNYQPKEDEEGLLPGVQSVFTKYEEEL
EINDFPQQARWKVTSKEALAQISEYSEAGLTVRGTYVPTGKNPPEGERKLYLAIESCSEL
SVQKAKREITRLIKEELLKLSSAHHVFNKGRYKVI
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaagaagctctagcacgcgtgaaaaatatcgtgaaaggaaacgttctagaagt
cgcagtagatccaaatccccttcagaaagagaacgaaaaaagaaggaagatagcaaaagc
tctaaaagtcgactgaaagaagaacgccgtgaggagaaacgtagaaaacgctctcgctcg
aggagtaaacatagggaaagcagcaggagggatcgttcgaaagatcgaagagagcatgaa
cgagaaaaagatcgagaaagggagagagaacgcgaaagggaacggcgcacagattctata
aaatccaattgtgaaaaagagttttttaacaaagaaaagaatgtcactaaaagcaaagaa
gatgaaattgaacaaagtgaaagttcagaagaggagcttgataaagaagaagaacaaaaa
cgattggaacaagaaatgattaaacgtagagaacggatcgaacgttggcgagctgaacgt
aaattaaaggaattggaaaataaaaaggacattccaaaaatagttcttccattgaatgtt
aaaaaatggtctttggaagatgaatctgaagatgaagatgaaaatacgaaagatggaaga
aagaaaccaggtttggatttaaacgacgagaacaacgaaaatgatgaaattaaaagccaa
aataagaaaccagaagaaaaaaaggaagatgaagaagaaattgaccctctagatgctttt
atgcaagatattgacaaagaagttagaaaggtaaatcaactttctaatccaccggatcaa
aacaagagcagtgattcgaaaggtgtggttattgttacaggattagctaaaaagagagta
gagcgtagtaataaaggcgaacttatagagcaaaatcaggatggccttgattattctagt
gaagaagaattagaagatattaaagatgctgcagttaatttagctaataagcataaaaaa
gaattggctaaaataaatcattcggaagtaaattattcgtctttcaggaaagacttttat
gttgaagttccagaattagcaagaatgactaatgaagaagtagaaaaacatcgcagcgaa
ttagaaggaattcaagttaaagggaaaggatgtccaaaaccaataaagacctgggcccat
tgtggagtatctaaaaaagaaatggatgttttggtgaaaaagttatgttttgaaaagccg
acacctatccaatgtcaagctataccagctattatgtctggcagagatttaataggtatt
gctaaaactggaagcggaaaaacaatagcttttattctaccaatgttccgtcatattctt
gatcaaccaccattagaagagggagatggacccattgcaattattatgactccaacccgt
gagttatgcatgcaaataggaaaagatatacgcaaattttctaaatcgctaggtttacga
cctgtttgcgtctatggtggaactggcatttctgagcaaatagctgaactaaagcgtgga
gctgaaataatagtttgtactcctggaagaatgattgatatgcttgctgctaactctggt
cgtgtaacaaatttgcgtagagttacgtatatagtgctagatgaagctgacagaatgttt
gatatgggatttgagccccaagtaatgcgaataattgacaatattagaccagacagacaa
acggtaatgtttagcgcaacattcccacggcaaatggaagccctagcacgtcgaattttg
aaaaaaccaattgaagttattgttggcggtcgatcagtcgtatgtaaagatgttgagcaa
aatattgccgtattagaagatgatgctaaattctttaaacttttggaactcttaggttta
tatcaggaacatggaagcataattgtttttgttgataagcaagaaaatgccgacagtttg
ctaaaagatttgatgaaagcttcatatccttgcatgagtttacatggtggtattgaccaa
tttgacagagattccaccattttagattttaagtctggaaaagtgagattattaatcgca
acgtcagttgctgcccgtggtttagatgtaaaagacttaatattagtcgttaattatgat
tgtcccaaccactatgaagattatgtccaccgtgttggaagaacaggtcgagctggaaac
aaaggtttcgcttggacttttttgactactgaacaaggaaggtatgctggagatataatt
agagctttagaattgtcttcaacgcctgttccgttagaattacaagaactttgggataca
tacaaagctttacaagaagcagagggtaaaaaagtgcacaccgggggaggttttagcggc
aaaggttttaagtttgatgaacaggaggcaaacgctgtcaaagagagcaaaaaacttcag
aaagctgctttaggtttagcggattctgacgatgatgaagacatagaaaatgacattgat
cagcaaatagaaaatatgtttgctgccaaacgtaatataaaagaaacttcagttgcgcca
actattccaccaccccaaatagttgtaccttctattgctgcaataactgttccaaatttg
caaccaccaataataccaactactggtcctgtgtctgctgaaaaacttgaattagcaaaa
cgtttagcatcaaaaataaacactgctaagaatcttggattagataccaaaacaacccaa
caaacagccgaagctatattaaaaggttcatcatcagctcctcctctaattacggctcgc
acagttgttgaacagttagctgctaaattgaataataaacttaattatcaacctaaagaa
gatgaagagggtttacttcctggagtacaatcagtatttacgaagtacgaagaggaatta
gaaattaacgatttcccccagcaagctaggtggaaagtcacatcgaaagaagcattagct
caaatatcggaatattcagaagctggattgaccgtgcgtggcacttatgttccaactgga
aagaaccccccagaaggtgagcgaaaattgtacttagcaattgaaagctgcagtgaatta
tcggttcagaaagcaaagcgtgaaataactcgtcttatcaaagaagaactattaaaactg
agctctgcacatcatgttttcaacaaaggtcgttacaaagttatttaa
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