Clostridium sp. AWRP: DMR38_02475
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Entry
DMR38_02475 CDS
T07742
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos00521
Streptomycin biosynthesis
clos00523
Polyketide sugar unit biosynthesis
clos00541
O-Antigen nucleotide sugar biosynthesis
clos01100
Metabolic pathways
clos01110
Biosynthesis of secondary metabolites
clos01250
Biosynthesis of nucleotide sugars
Module
clos_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DMR38_02475 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DMR38_02475 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DMR38_02475 (rfbC)
Enzymes [BR:
clos01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DMR38_02475 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZV59001
UniProt:
A0A3T0M2D1
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All DBs
Position
540980..541546
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AA seq
188 aa
AA seq
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MGKFNFKSVDIEGVYIIETGVFGDNRGYFMETYNYNDFKSAGLDEVFVQDNKSKSKKGVL
RGLHFQKNYSQGKLVRVEKGEVFDVAVDLRERSSTYGKWIGVTLSEENRKQFYIPKGFAH
GFLVISDEAEFCYKCTEFYHPEDEGGIIWNDPDINIKWPLEGIDNIIFSERDKLWPTLKE
CKNKIKKY
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ataggtaaatttaattttaaatcagtagatatcgaaggtgtgtacataatagaaacaggt
gtttttggggataatagaggttattttatggaaacgtataactataatgattttaagtcg
gcaggtcttgatgaggtgttcgttcaggataacaaatctaaatctaaaaagggtgtttta
aggggacttcactttcaaaaaaattattctcaaggaaaattggtgagagtagaaaaaggg
gaggtatttgatgtcgctgtagatttaagagagagatcctctacctatgggaaatggata
ggggttacactatctgaagaaaacaggaaacaattttatatcccaaagggatttgcccat
ggatttctagttatttcagacgaagcagaattttgctataaatgcactgagttttatcat
cctgaagatgaaggtggtattatatggaatgatcctgatataaatataaaatggcctctt
gagggaattgacaatattattttttctgaaagagataaattatggcctacactgaaggag
tgcaaaaataaaataaaaaagtattga
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