Clostridium sp. AWRP: DMR38_06345
Help
Entry
DMR38_06345 CDS
T07742
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
clos
Clostridium sp. AWRP
Pathway
clos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DMR38_06345 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clos03400
]
DMR38_06345 (priA)
Enzymes [BR:
clos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DMR38_06345 (priA)
DNA repair and recombination proteins [BR:
clos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DMR38_06345 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_30
AAA_19
SLFN-g3_helicase
T2SSE
nSTAND3
AAA_11
zinc-ribbons_6
Flavi_DEAD
IstB_IS21
PIF1
PhoH
YjdM_Zn_Ribbon
TrwB_AAD_bind
FtrD-like
AAA_23
Viral_helicase1
zinc_ribbon_15
AAA_16
AAA_22
DUF1258
Motif
Other DBs
NCBI-ProteinID:
AZV56250
UniProt:
A0A3Q9S6L6
LinkDB
All DBs
Position
1365328..1367529
Genome browser
AA seq
733 aa
AA seq
DB search
MYTYAGIIVNNSSVKLDKIFTYKIPDKLGGKVNIGSRVKIPFGMGNNKLDGFVVRLYEDD
IENRKIKEISDICEKIPLFTKEDLTLIEKMREIYLCTYLECIKVFIPRGILKGMKKKKES
LIYIGKDLEGNFNKKPYIDIYKVVKENNGIYTKNFISKNYKLSLSSINTMIKHGFLVISE
KTVDRYDVRQYRTYSKKVLNSEQQHAVDNIINSDKNIFLIHGVTGSGKTEIYMHLVEKAM
DKGKESIILVPEIALTPQMVERFKGRFGKNISVFHSKLSDGERYDEWMRVKLGQVKVAIG
ARSAVFLPFNNLGFIIIDEEHEWSYKSDSNPKYNAREIGQMKCKQYNCKMILGSATPSIE
TYYKCKTGEIELIDIKNRADGALMPEVEIVDMRQELINNNKSIFSRELYQCICNRLSKGE
QIILFLNRRGYSTFVSCRKCGYVFKCNNCDISYTYHQNQRKLVCHYCGSRIEVPKVCPKC
GSKYVKYFGVGTEKVENQIKAYFPKARTLRMDFDTTRSKNSYENIYNTFKEGKADILIGT
QMVAKGLDFKNVTLVGVVAADLSLNLPDFKSTERTYELITQVSGRAGRGEKSGKVIIQTY
NPENYSIRYAAKNDYSSFYREEIGIRENMSYPPFADILLINMNSKNENVLIKNIQNVGIF
LKKLLEKDDKIKILGPCPCQISKIKELYRWQIILKGKITINIAQNVKKVVYDLLKDVYND
IRVSIDRNPNSML
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
gtgtatacatatgcaggtataattgtaaacaatagttctgtaaaattagataaaattttt
acctataaaataccagacaaattgggtggaaaagttaacataggttctagagtaaaaata
ccttttggtatgggaaacaataaattagatggatttgttgttaggttgtatgaagatgat
atagaaaataggaaaattaaagaaataagtgatatatgtgaaaaaattccactttttaca
aaagaagatttgactcttatagaaaaaatgagagaaatatacttgtgtacatatctagaa
tgtataaaggtatttattccaaggggaatacttaaaggaatgaaaaagaaaaaggaaagc
ttaatttatattggtaaagatttagaaggaaactttaataagaaaccctacatagatata
tataaggtagtaaaagaaaacaatggaatatacactaagaattttataagtaaaaattat
aaattgtccttgtcatctataaatactatgataaaacatggatttcttgtgattagtgag
aaaactgtagataggtatgatgtaagacagtatagaacgtattctaaaaaggtactgaat
agtgagcagcagcatgcagtagacaatataataaactcagataaaaacatatttttgatt
catggagttacaggtagtggtaaaactgaaatttacatgcatcttgttgaaaaggctatg
gataagggtaaagaatctataatactggtgccggaaatcgcacttactccacaaatggtt
gaaagatttaaaggaagattcggaaaaaatataagtgtatttcatagcaaattatcagat
ggggaaagatatgatgaatggatgagggtaaagcttggccaggtgaaagttgcaattggt
gcaagatctgcggtatttcttccatttaataacttaggatttataataatagatgaagaa
catgagtggagctacaaatcagatagtaatccaaagtataatgctagagaaattggacag
atgaaatgtaaacaatacaattgtaaaatgatacttggttcagcaacaccttctatagaa
acgtattataaatgtaagactggtgaaattgaacttatagatataaaaaacagagcagat
ggggcacttatgccagaagttgaaattgtagatatgaggcaggaacttataaataacaat
aaatctatattcagcagggaactttatcaatgtatttgtaatagactttcaaagggtgaa
cagataatattgtttttaaataggagaggctattccacctttgtttcttgcagaaagtgt
ggttatgtatttaaatgcaataattgcgatatatcctatacctatcaccagaatcaaaga
aaacttgtttgtcattattgtggaagtaggatagaagtacctaaagtttgtcctaaatgt
ggtagtaaatatgttaaatattttggtgtgggaacagaaaaggttgagaaccagataaaa
gcttatttccctaaagcaagaacacttagaatggattttgatactacaagaagtaaaaat
tcttatgaaaatatctataatacattcaaagagggaaaagcagatatacttataggaact
caaatggtagcgaagggtttggattttaaaaatgtaactttagtaggtgtagtggctgca
gatttgtcacttaatttgccggattttaaatctacagagaggacctatgaacttataact
caagtctcaggaagggcaggtagaggagaaaagtctggaaaagtaattattcaaacttat
aatcctgaaaattacagcataagatatgcagctaaaaatgattacagtagtttttatagg
gaagaaattggaataagggaaaatatgagttatcccccatttgcagatatacttcttata
aatatgaatagtaaaaatgaaaatgtattaataaaaaatatacaaaatgttggtatattc
ttaaaaaaacttcttgaaaaagatgataaaattaaaatattaggaccatgcccctgtcaa
atatctaagataaaggaattgtacaggtggcagataatattaaaaggaaaaataaccata
aatattgcacaaaatgttaaaaaagtagtttatgatttattgaaagatgtttataatgat
ataagagttagtatagatagaaatcctaacagtatgttgtaa
DBGET
integrated database retrieval system
