Campylobacter lari CCUG 22395: UPTC4110_1173
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Entry
UPTC4110_1173 CDS
T03551
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
clq
Campylobacter lari CCUG 22395
Pathway
clq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UPTC4110_1173 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clq03400
]
UPTC4110_1173 (uvrB)
DNA repair and recombination proteins [BR:
clq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UPTC4110_1173 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UPTC4110_1173 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
Microtub_bd
SWI2_SNF2
Focal_AT
Motif
Other DBs
NCBI-ProteinID:
AJD03716
LinkDB
All DBs
Position
1140282..1142255
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AA seq
657 aa
AA seq
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MFELTSDFKPSPDQKQAIDGIVKSIKAGNKYQTLLGVTGSGKTFTMANIIKNLNMPTLIM
SHNKSLCAQLYSEFKGFFANNHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLR
LSASASLLSYNDVICIASVSANYGLGNPSEYVGMVLILELNMQISQKELLKKLVDMGYKR
NDNFFDRADFRVNGDIVDIYPAYYEDEAIRLEFFGDELEAMYHYNVLENKKGKDLKKFIL
YPTSQFSVGETRLKEAIKGIKAELNERLAYFENENKLVEAQRLKQRVEFDLEMLQSTGMC
KGVENYALHLTGLKSGDTPYTLFDYFAIKNQDFLVIVDESHVSLPQFRGMFAGDRSRKQT
LVDYGFRLPSALDNRPLMFDEFINKNCKFLFVSATPAPLELELSKENIFYQIMRPTGLLD
PKIEIKDSENQVEILYDEAKKVIERNERVLITVLTKKMAEELSKYYLELGLKVKYMHSEI
DAIERNEIIRGLRSGAFDILIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTALIQTMG
RAARNVNGKVLLFAKKITKSMQEAIDTTNERRTLQEAYNKKHNITPTSVKRNIEESLKHE
LEQGEIYRKGKELEKMPAKERAKIVKELRKQMLEAAKNLEFEKAAMLRDEINKLRTL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacttactagtgattttaagccaagtcctgatcaaaaacaagccattgatggt
atagtaaaaagcattaaagcgggtaataaataccaaaccttactaggtgttacaggtagt
ggaaaaactttcactatggcaaatatcattaaaaacttaaacatgcctactcttatcatg
agtcacaataaaagcttatgcgcgcaactttatagtgaatttaaaggcttttttgcaaat
aatcatgtggagtattttataagctattatgattattatcagccagaagcttatatacca
agaacggatgtgtttatagaaaaagatagctctactaatgaagatttagaaagattaaga
ctaagcgcaagtgcttcgcttttaagttataatgatgttatttgtatagctagtgtttcg
gcaaattatggcttaggaaatccaagtgagtatgtaggtatggttttaattttagaacta
aatatgcaaatttcacaaaaagaacttttgaaaaaacttgtggatatgggctataaacgc
aatgataatttcttcgatagggctgattttagagtaaatggagatatagtagatatatat
ccagcttattatgaggatgaagctattaggcttgagttttttggcgatgagcttgaggcg
atgtatcattataatgtcttagaaaataaaaaaggtaaagatttaaaaaaattcatactt
tacccaactagtcaatttagtgtaggtgagactaggcttaaagaggctataaaaggcata
aaagctgaattaaatgaacgccttgcttattttgaaaatgaaaataaactcgtagaagca
caaaggttaaaacaaagagtagaatttgaccttgaaatgcttcaaagcactggcatgtgt
aaaggagttgaaaattacgctttgcatttaacaggacttaaaagcggtgatacaccttat
actctttttgattattttgccattaaaaaccaagactttttagtcattgtagatgaatcc
catgtatctttaccacaatttcgtgggatgtttgcaggggatagaagtagaaagcaaact
ttggttgattatggttttcgcttgccaagtgccttagataacagacctttgatgtttgat
gaatttattaataaaaattgtaaatttttatttgtttcagctacacctgcgcctttagaa
ctagaattaagcaaagaaaatattttttatcaaatcatgcgtccaacagggcttttagat
cctaaaatagaaatcaaagatagtgaaaatcaagtagaaattttatacgatgaagctaaa
aaagtcatagagcgcaatgaaagagttttaataaccgttttaactaaaaaaatggctgaa
gagcttagtaaatactacttagaacttggtttaaaagtaaaatacatgcattcagaaatt
gatgcaatagagcgtaatgaaatcatccgtggtttaagaagtggtgcttttgatatttta
atcggaattaatcttttaagagaaggacttgatttacctgaagtttctcttatagccatt
atggatgcagataaagaaggctttttaagaagtaccactgcgctcattcaaacgatgggg
cgtgctgctagaaatgtcaatggaaaagttttactttttgccaaaaaaatcacaaaatct
atgcaagaagctatcgatactaccaatgaaagaaggactttacaagaagcttataataaa
aaacacaacatcacaccaacctcagtaaaaagaaacatagaagaaagtttaaaacatgaa
cttgagcaaggagaaatttatcgcaaaggcaaagaacttgaaaaaatgcctgcaaaagaa
cgcgctaaaatagtaaaagaattaagaaaacaaatgttagaagcagctaaaaatcttgaa
tttgaaaaagcggcaatgcttagagatgagattaataaattaagaaccttataa
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