Campylobacter lari RM16701: UPTC16701_0474
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Entry
UPTC16701_0474 CDS
T03550
Symbol
waaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
clr
Campylobacter lari RM16701
Pathway
clr00540
Lipopolysaccharide biosynthesis
clr01100
Metabolic pathways
clr01250
Biosynthesis of nucleotide sugars
Module
clr_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
UPTC16701_0474 (waaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
clr01005
]
UPTC16701_0474 (waaD)
Enzymes [BR:
clr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
UPTC16701_0474 (waaD)
Lipopolysaccharide biosynthesis proteins [BR:
clr01005
]
Core region
UPTC16701_0474 (waaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
Ldh_1_N
DAO
TrkA_N
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
AJD04531
LinkDB
All DBs
Position
447998..448951
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AA seq
317 aa
AA seq
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MKIVITGGAGFIGSALALELQNKHEVLIVDKMRSSATFENGNLESFGHFKNILDFEGELY
VGDINDEKTLKVIKDFKPDAIFHKAAISDTTVYDQNKVLKTNLNTFKDFIELALELNAKL
IYASSASVYGDAPSPQTVNLSEAPKNPYAFSKLMMDKLAKKYFDKMHIVGLRYFNVYGKG
EFFKNSTASMILQFGHQILAGKSPRLFEGSNQIYRDFVYIKDVVSANLQALEAKSGIYNV
ATGKARTFQDIVDILQKELNTNYPCEYIPNPYKNAYQFHTQAKLDESFSYRAKFSLEEGI
KDYLDEIKRLYEKEVNA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtgataacgggtggagcgggctttataggctctgctcttgctttggaactt
caaaataagcatgaagttttgattgtggataaaatgcgttcaagcgctacttttgaaaat
ggaaatttagaaagttttggtcattttaaaaatattttagattttgaaggtgagctttat
gtgggtgatattaatgatgaaaaaactttaaaagttataaaagattttaaacccgatgcg
atctttcataaggccgcaatttcagatacaactgtttatgatcaaaacaaagttttaaag
actaatttaaatacttttaaagattttatagaacttgccttagagcttaatgcaaaatta
atctatgcaagttcagcttcagtttatggagatgctccaagcccgcaaactgtaaattta
agtgaagctcctaaaaatccttatgcattttcaaaattaatgatggataaattagcaaaa
aaatactttgataaaatgcatatagttgggcttagatattttaatgtatatggcaaggga
gaattttttaaaaatagtactgcttctatgattttgcaatttggacatcaaattttagcg
ggtaaaagcccgcgtttgtttgagggaagcaatcaaatttatcgtgattttgtatatatt
aaagatgttgtgagtgcaaatttacaagctttagaagcaaaaagtggaatttataatgta
gctacaggcaaggcaagaacttttcaagatatagttgatattttacaaaaagaattaaat
actaattatccttgtgaatatattcctaatccttataaaaacgcttatcaattccatacc
caagcaaaattagatgagagtttttcatatagagctaaatttagtcttgaagagggtata
aaagattatttagatgagattaaaaggctttatgaaaaggaagtaaatgcttga
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