Clostridium bornimense: CM240_2400
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Entry
CM240_2400 CDS
T03165
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
clt
Clostridium bornimense
Pathway
clt00521
Streptomycin biosynthesis
clt00523
Polyketide sugar unit biosynthesis
clt00541
O-Antigen nucleotide sugar biosynthesis
clt01100
Metabolic pathways
clt01110
Biosynthesis of secondary metabolites
clt01250
Biosynthesis of nucleotide sugars
Module
clt_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
clt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CM240_2400 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CM240_2400 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CM240_2400 (rmlC)
Enzymes [BR:
clt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CM240_2400 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CDM69537
UniProt:
W6S5B0
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Position
rep1:complement(2623252..2623809)
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AA seq
185 aa
AA seq
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MGKFNFIETEIKDVYIIEPTVFGDNRGYFMETYNYEEFAAAGLDMKFVQDNQSKSKKGVL
RGLHLQTEHTQGKLVRVIKGEVYDVAVDLRKDSPTYGKYVGVVLSEENKKQFYIPEGFAH
GFVVLSEEAEFTYKCTDFYHPEFEMGIIWNDPDVAVEWPLEGIDEVLLSEKDKKWPLFKD
SKIEF
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatttaattttatagaaactgaaattaaagatgtttatataatcgagcctaca
gtattcggtgataacagaggatactttatggaaacttataattatgaagagtttgcagcg
gcaggtcttgatatgaagtttgttcaagacaatcaatcaaagtctaaaaagggtgtttta
agaggattacatcttcaaactgaacatactcaaggtaaacttgtaagagttattaaaggt
gaagtttacgatgtagcagtagacttaagaaaagattctccaacatacggtaaatatgta
ggggttgtattaagcgaagaaaataaaaagcaattctatattccagaaggatttgctcat
gggtttgtagtattgtctgaagaagcagaatttacttataaatgtacagatttctatcat
ccagaattcgaaatgggtataatttggaatgatccagatgtagcagtagaatggccatta
gaaggaattgatgaagtattattatcagaaaaagataaaaagtggcctttgtttaaagat
agtaaaatagagttttaa
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